Pyrus communis (pear): 137709867
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Entry
137709867 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137709867
Spliceosome [BR:
pcox03041
]
Complex A
U2 snRNP components
U2 related factors
137709867
Complex B
137709867
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GFIT
Other DBs
NCBI-GeneID:
137709867
NCBI-ProteinID:
XP_068304944
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Position
12:complement(424878..431336)
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AA seq
1171 aa
AA seq
DB search
MEEVKHKPRKEGESKRSHRDRDREKERNGERHRDKDKDKRDRDSRRYEREKSSDSEERYD
REKHGDRDSDRKRNRDDERERTRDKKRDKDKERDKDKEKEKRDRTREKEKEREKERQREK
EREREKERQREKEREKEKEHEREREREKEKERERERERREREREVEDKREREREREREKD
RDRERRVRERERRRDIDADDIDDDGRERDRKRPRKDNNDYKERERERSSSRSNRHRDDAD
GSPRKKSDEGDSSKEEQPTREEELEDEQRKLDDEMEKRRRRVQEWQELKRKKEETEREKN
GEGDADEPKSGKAWTLEEESDDEELPSLEKSETGIDVDEEDDTDRKVGDAVAVVSEDETA
APALHNGADDVADDEEVDPLDAFMNSMVLPEVEKLTNAVEPSIVDEKNKDKKDGRNNGEQ
PRRGSNKSMGRIIPGEDSDSDYGDLENDDDPVEDEGDDEFIKRVKKTKAEKLAVVDHSKI
DYDPFRKNFYIEVKEISRMTPEEVGVYRKQLELKIHGKDVPKPIKTWHQTGLTSKILETI
KKLNYEKPMPIQAQAVPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPI
GLIMAPTRELVQQIHSDIKKFTKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMI
DILCTSGGKITNLRRVTYLVVDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQV
EVLARKVLNRPVEIQVGGRSVVNKDITQLVEVRMENERFLRLLELLGEWYEKGKILIFVE
SQNKCDALFRDLLRHGYPCLSLHGGKDQTDRESTITDFKSNVCNLLVATSVAARGLDVKE
LELVINYDSPNHYEDYVHRVGRTGRAGRKGCAITFISGEDARYAPDLVKALELSEQVVPD
DLKSLADNFTAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDS
EDEDDGIRKAGGDISQQAALAQIAAIAAASKASTASMQTPASAAQLLPSSGLPVSLPGVL
GLALPGTAAVAAGTGLPLVGNDGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELEIND
FPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKVTGPGDRKLYLFIEGPTEQSVKR
AKTELKRVLEDISNQALSLPGGAQQGRYQVL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggtcaaacataaacctaggaaggagggggaatccaagaggagtcatcgagat
cgggatcgtgaaaaggagagaaatggagagaggcacagggataaagataaagataagaga
gaccgtgatagtcggcgctatgagagagaaaagagttctgattctgaggagaggtatgat
agggagaagcatggagacagggatagtgataggaagcgcaaccgagatgatgaaagagag
agaacgagagacaaaaagagggataaagataaagagagggacaaagacaaagaaaaggag
aagagagatagaactagagagaaggaaaaggaaagggaaaaagaaaggcaaagagaaaaa
gaaagagaaagggaaaaagaacgacaaagagaaaaggagagagaaaaagaaaaagaacat
gaaagagaaagagaaagagaaaaagaaaaagaacgagaaagagagagggagagaagggaa
cgagaaagagaggtagaagataagagggagcgggagagggagagggagagggaaaaagat
agagatcgggagcggagggtgcgggagagggagaggcgcagggacattgatgctgatgat
attgatgatgatggtagggagcgtgataggaagcgacctaggaaagataacaatgactac
aaggagagagagagggaaaggagtagcagcaggtcaaacagacatagggatgatgcagat
gggagccccagaaagaagtctgatgaaggtgattcctctaaggaagaacaaccaacccgt
gaggaggagctggaggatgaacaacggaaattggatgatgaaatggaaaagcggagaagg
agagttcaggaatggcaagagttaaaaagaaagaaggaagaaactgagagagagaagaat
ggggaaggggatgctgatgaacctaagtcaggaaaggcctggactcttgaagaagaatct
gatgatgaagaactaccttccttagagaaatcagagacaggtatagatgttgatgaagaa
gacgatactgacagaaaagttggagatgctgtggcggtagtttctgaagatgaaacagct
gcacccgctttgcacaatggggctgatgatgttgctgatgatgaggaagttgatccttta
gatgcttttatgaattctatggtattgcctgaagttgagaagctgaccaatgcagtggaa
ccatcaattgttgatgaaaagaacaaggataagaaggatggtcgaaacaatggtgaacaa
ccaaggagaggttcaaataaatctatgggcagaataattcctggggaggattctgactca
gattatggggacttggagaatgatgatgatcccgtagaagatgaaggtgatgatgagttc
ataaaaagggtgaaaaaaacaaaagctgagaagcttgctgtagttgatcactcaaagata
gattatgatccatttcgtaaaaatttctatattgaagtgaaggagatctcaagaatgacc
ccagaagaggtgggggtgtatcggaaacaattggaattgaagatccatggtaaagatgtg
cccaagcccatcaagacctggcaccaaactggacttacaagtaaaatcttggaaacaata
aaaaagcttaactatgaaaagccaatgccaattcaggctcaggcagtgcctataattatg
agtggtcgagactgcattggcattgcaaagactgggtcaggcaaaacccttgcatttgtg
ctgccaatgctgaggcatatcaaggaccagccacctgtggtagctggagatgggcctatt
gggcttataatggcaccaacgagggagcttgttcagcaaattcacagtgatattaaaaag
tttacaaaggtacttggtctcaggtgtgtgcctgtatacggaggttctggtgttgcccaa
cagattagtgaattgaagcggggggccgaaattgtcgtctgtacccctggtaggatgatt
gacatactgtgcacaagtggggggaaaataacaaatctgcgtagagttacttatttggtt
gtggatgaagctgatcgaatgtttgacatgggctttgaaccacagatcacccgaattgta
caaaatatccggcctgatcgtcaaactgttttgttttctgccaccttccctcgccaggtt
gaagtcttggcacgcaaagtcttaaacagacctgtggaaatacaagttggtggaaggagt
gttgtgaataaggacataacacaattagttgaagtgaggatggaaaatgaaaggttcttg
agattgttagagttgcttggggaatggtatgagaaaggaaaaattttgatatttgttgag
tcacagaacaaatgcgatgcgttgttcagggatctgcttaggcatgggtatccttgtctc
tcacttcatgggggcaaagatcagacagatcgtgagtccaccataactgactttaagagc
aatgtttgtaatttgttggttgcaacaagtgttgctgccagagggttagatgtgaaggag
cttgaactggtaatcaattatgatagtccgaatcactatgaagactatgttcaccgtgtt
ggccgaacagggcgagctggccggaaaggttgtgctataacttttatctctggggaagat
gctagatatgctccggatcttgtcaaagcgttggaactctctgagcaagttgttccagat
gacctaaagtctcttgctgataatttcacggcaaaagtaaatcagggacttgagcaagct
catgggactggttatgggggaagtggtttcaaatttaatgaagaggaagatgaagtgagg
agagcagcaaagaaagcacaggccaaggaatatggttttgaggaggacaagtcagattca
gaagatgaagatgatggtattcgaaaggcagggggcgacatctcacagcaggctgccctt
gctcagatagctgccatagctgctgcctccaaagctagtacagcttcaatgcagacccct
gcctctgctgcccaactacttccaagcagtggactgcctgtttctcttccaggtgtcctt
ggtctagcgttgccaggaacagcagcagttgcggctgggactggtctgcctcttgtgggc
aatgatggggctgctcgggcagcagcaattgcagctgcaatgaacttgcagcataacttg
gcaaagattcaagctgatgcaatgcctgaacactatgaagcagaattggagataaatgat
tttccccagaatgctcgatggaaggttacccacaaggaaactttgggccctatatcagag
tggactggggctgccattactaccaggggtcagtatttcccaccaggaaaggttacagga
ccaggagatcgcaagctctacctatttatcgagggccctactgaacaatctgtcaagaga
gctaagacagaattaaaacgtgttttggaagatatctcaaatcaggcattatcgcttcct
ggtggagctcagcaaggcagatatcaagttttataa
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