Pyrus communis (pear): 137709872
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Entry
137709872 CDS
T10779
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pcox Pyrus communis (pear)
Pathway
pcox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137709872
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcox01002
]
137709872
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137709872
03036 Chromosome and associated proteins [BR:
pcox03036
]
137709872
Peptidases and inhibitors [BR:
pcox01002
]
Metallo peptidases
Family M1
137709872
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137709872
Coactivators
SAGA/TFTC/STAGA complex
137709872
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137709872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
137709872
NCBI-ProteinID:
XP_068304950
LinkDB
All DBs
Position
12:24371263..24383729
Genome browser
AA seq
1452 aa
AA seq
DB search
MAKPRKPKNEDAKPDNSGPVVRHQKLCLSIDVDKRRIYGYSELKIVVPEIGIVGLHAENL
GIESVSVDGEQTEFEYYPQSNHKDAESERRWSWVTSPSSAADAAGSTYISALERELVPNL
LINCCKAFKAGSDPQEQLLGDNEVQQSSGEAKQNVRLVRVDYWVEKAEAGIYFHDAILHT
DNQIRRARCWFPCIDDNSQSCCYDLEFTVAQNLVAVSTGNLLYQVLSKDDPPRKTYVYRL
DVPVSARWISLVVAPFEILPDQQFGLISHMCLPINLSKLRNTVEFFHSAFSCYKDYLAIE
FPFGSYKQVFIEPEMAVSSLSSGASMSVFSSQVLFDEKIIDQTIDTRIKLAFALARQWFG
VYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKLQANCAVCKADDSGATALS
SAASCKDLYGTQCIGIYSKIRSWKSVAILQMLEKQMGPESFRKILQAIVNRAPDKIRSLR
SLSTKEFRHFANKVGNLERPFLKEFFPRWVELCGCPLLRMGFSYNKRKNMVELAVLRGCT
GGSDSIASAVNANPEPEKRDIDNGWPGMMSIRAHELDGTFDHPVLPMAGETWQLLEIQCH
SKLAARRFQKPKKSSKLDGADDNGDATPALDMRSSMESPLLWMRADPEIEYLAEIHFNQP
VQMWINQLEKDKDVVAQAQAIATLESLPQLSFSVVNALNNFLIDSKAFWRVRIEAAFALA
NTASEDTDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDISEYFVLEAIPHAIAMVRAADK
KSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALIESVGELEFGQQSILLLSSLLKRIDRL
LQFDRLMPSYNGILSVSCIRALTQIALKLLGFVPMDRVFELVKPFRDIKAVWQVRVEASR
ALLDLEFHCKGIDAALQLFIKYLDEETSFRGQVKLAVHAMRLCQIRGGSDLTDNIRSETL
VALLRLLEGQMAFNNIFLRHHLFCILQILAGRPPTLYGVPRDHKPFHLGDAESFQEQKNI
FAAFIPESKYVEPPSEAPNLSHDDLTAPETSRDVFAAPEMFTDGFSIPDPETSRDGFALP
AASKDDLGAPEPTTDGFGAPEPPGGGLGDPEPSGGSLVAKEPSIGGVGAPEPPIGSFDGL
TVSEPIKDSLAVLEPFKDADTVSNSHKRKLTVKIRVKSSATTSRAEGDNQTVERSQGGHL
ETDRGASSSVSVDAPHKNFAEVSLSNQNLEEVNSWHDLGSRMTASIGSAKLASDVDDIGK
ELQCTADSSKVSALPQPEDPSPSFIQDNRDAEVQKYASLQELSVPRNDINGGSSGMADSL
PRGKEKEKKKDKEKKRKRDGHKGHRDNPEYLERKRLKKEKKQKEKEIAKLLNESAKVPST
ELPSKTEVHGVKSATVQLRPVEPSGSNKLAITGVETARPAPSEGATSATPSGTTSATPKF
RIKTKIRTLNNP
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccccgaaagcccaagaacgaagacgcaaagcctgacaactccgggcccgtc
gtccgccaccagaagctctgcctctccatcgacgtcgataagcgtcgcatttatgggtac
tctgagttgaagattgtggtcccagaaattgggattgtagggttacacgcagagaatttg
gggattgagagtgtttcagtcgacggtgagcagaccgagttcgaatactacccgcagagt
aatcataaagatgcggagagcgagaggagatggagctgggtgacatcgccgagctctgct
gccgatgcggcagggtcaacatatatatcggctcttgagagagagctggtcccgaattta
ctgatcaattgctgtaaggctttcaaggccggaagcgatccgcaggagcaactgcttggg
gataatgaagtgcagcagtcttctggagaagccaagcagaatgtgaggttggttcgtgtt
gattattgggtagaaaaagcagaggcaggaatttattttcatgatgccattctacatact
gataaccagatacggcgtgcacggtgctggttcccttgtatagatgacaattcacaaagt
tgctgctatgatctggagttcactgttgcacaaaatcttgtggctgttagcactggaaac
ttactataccaggttttgagcaaggatgatcctcctcgcaaaacatatgtttatagatta
gatgttccagttagcgcccggtggatatctttggtggttgcgccttttgaaatccttccc
gatcagcagtttggtctaatatctcacatgtgcttgcctattaatctgtcgaagcttcgg
aatactgtagagtttttccatagtgcatttagctgttataaggattaccttgcgatagaa
tttccttttgggtcatacaagcaagtttttattgagcccgagatggcagtatcatcatta
agttcgggggcatccatgagcgtttttagttctcaagttttatttgatgaaaagatcatt
gatcagaccattgacacgaggattaaacttgcgtttgctcttgcaagacaatggtttggt
gtctatatcactcccgaggcacctaatgatgagtggctgctggacggtcttgctgggttt
ttgacagatttttttatcaaaaaacatttgggaaataatgaagcccgctaccggagatac
aagttgcaggcaaattgtgctgtttgcaaagcagatgatagtggtgcaaccgctttaagt
tctgctgcttcttgtaaggatttgtatggaactcaatgcattggaatatacagcaaaatt
aggtcatggaaatctgtggcaatccttcaaatgctggaaaagcagatgggaccagagtct
tttcgtaaaattttgcaggcaatagttaatagggctccagataagatccgttctttaaga
tcccttagtacgaaggagtttaggcattttgctaataaggttggcaatcttgagcgtcca
tttcttaaagaattttttcctcgctgggtggaattgtgtggttgtccactgctgaggatg
ggcttctcctataacaagaggaagaatatggttgaattggcagtgttacgtggatgcaca
ggcggatcagattcaattgcttcagcagttaatgcgaatccagaacctgaaaagcgagac
attgacaatggatggcctggaatgatgagcatcagggctcacgaacttgatggtacgttt
gatcatccagttctgccaatggctggagaaacatggcagctgctggaaatacagtgccat
tcaaagcttgctgctagacgctttcagaagcctaaaaagagttcaaaactagatggggct
gatgataatggggatgctacgccagctctagacatgcgttctagtatggagtcgccattg
ttgtggatgagggcagacccggaaattgaatatcttgctgaaattcatttcaatcaacct
gtacagatgtggattaatcagttggagaaggacaaagatgtcgttgcacaggcacaagca
attgcaacactggagtctctaccacagctttccttttctgttgttaacgctctgaataat
ttcctcattgactccaaggccttctggagagttcgaattgaggccgcgtttgctttggct
aatacagcatctgaggatactgattgggctggtctactccatttagtgaaattttataaa
agccgaaggtttgatgcaaacatcggactccccaagccaaatgacttccatgacatttct
gagtactttgttcttgaggccattcctcatgctattgctatggtcagagctgctgacaag
aaaagtccaagagaggctgtagagtttgttttacaacttttgaagtacaatgacaacaat
gggaacccttactctgatgtcttctggcttgctgcattaatcgagtctgttggagaactt
gaatttgggcaacagagtattctccttttatcgtctcttctgaagcgcattgatcgcctc
ttgcaatttgacaggttgatgcctagctacaatggtatcttgtcggtcagttgtattagg
gccttgacacagattgccctaaaactgttgggatttgttcctatggatcgcgtgtttgaa
cttgtgaaaccttttcgggatatcaaggcagtatggcaagttcgggttgaagcaagcaga
gcactccttgatcttgaattccattgtaaaggcattgatgcagctttgcaactgtttatc
aaatatttagatgaagagacgtccttccgagggcaggtgaagctggccgtgcatgctatg
aggttatgccagattagaggtggatctgatcttactgacaacatcaggagcgaaactctt
gtggctttgcttcgtctacttgaaggccagatggcttttaataatatctttcttcgtcat
cacttattctgcatcctacaaatccttgccggaaggccgccaacactatatggagtgcca
agagatcataaaccatttcatttaggtgatgcggaaagcttccaagagcagaaaaacatc
tttgctgctttcattccagaaagtaaatatgtggaaccaccttccgaagctccaaacctt
tcacatgatgatttaactgctcctgaaacttccagagatgttttcgctgctccagaaatg
tttacagatgggttttctattccagatccagaaacttccagggacgggtttgcccttcca
gctgcttccaaggatgatttgggtgctccagaacctacaactgatggttttggtgctcca
gaacctcctggtggtggtttgggtgatccagaaccttctggtggcagtttggtcgctaaa
gaaccttccattggtggtgttggtgctccagaacccccgattggtagttttgatggctta
acggtttcagaaccaatcaaggatagcttggctgttctggaacctttcaaggatgcagat
accgtttctaacagccataaacggaagctgacggttaagatcagggtcaaaagttctgct
actactagtagagcagaaggtgataatcaaactgttgagaggtcgcaaggtgggcatctt
gaaactgatcgtggcgccagcagttcagtatctgtggatgctccgcacaaaaactttgca
gaggtgagccttagcaatcaaaatcttgaggaagttaactcttggcatgatcttggatcc
cggatgactgccagcattggtagcgcaaaacttgctagcgatgtcgatgatataggaaag
gaattgcagtgcactgccgattctagcaaagtttctgcactgcctcagcccgaagatcca
tcacctagctttatccaagataaccgagatgcagaagtacagaagtatgcaagtctccaa
gaactttcggttcctaggaacgatattaatggcggttcatctggaatggcggattctctt
cctcgcgggaaagaaaaggagaaaaagaaagacaaggaaaagaaacgaaagcgggatggc
cataagggccaccgagataatcccgagtatttggagcggaagcgcctaaagaaggagaaa
aagcagaaggagaaagaaatagcgaagttgttgaacgagagcgccaaagtaccatccacg
gagctaccaagtaagacagaggtgcatggagtgaagtcggccactgtgcaactcaggccg
gtcgagcctagcggttccaacaaattggcaatcacaggggttgaaaccgccaggcctgcg
ccatccgaaggtgctacttccgctactccttccggtacaacttccgctactccgaagttt
cgtattaagacaaagatccgaacactgaacaatccatga
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integrated database retrieval system
