Pyrus communis (pear): 137710113
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Entry
137710113 CDS
T10779
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137710113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137710113
03036 Chromosome and associated proteins [BR:
pcox03036
]
137710113
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137710113
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
137710113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
137710113
NCBI-ProteinID:
XP_068305169
LinkDB
All DBs
Position
12:18991969..18995590
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AA seq
604 aa
AA seq
DB search
MGGDSLPFPGWGSTHSGGSSSGSPFYSQSFLEHEWRNNNASAPNLCRCGENGLFGAAQSS
WPFPPFGVPYTPGPSSSLSPITGFWMFVPFSSTCIPAFASASTPAFGATGFSPFARTISP
MFGSRGDGSYGGSFGASNTPAFGSSSSTVGTSSNQAFGASSTIGFGSFSSTQHLSSSPTS
AFTQSSFRFSSSPFGASSPFGSQCFPFVSQSTTIGNTGQSAFGGQQRKGSSVASYTATPA
VDDGRKVESISAMPEYKDKSHEELRVEDYKLGKGVQFPAGGSTIDISTSQPNPLHPAPSL
LQPSSSNPIAFGAPLRLVLQATQLLLPLFVSSQPLQSSGSVFNIVSQTPQGNTGGSTGIL
GQNGFESFSSIPAFGQLSYMSGCCQLCASCGAQSTTGNTALGKPVSERRPDEKFHSISSM
PIYGDRSHEEIRWQNYQLGDKGGPALGGVTHFTLLTKKPAPTFAQTSLSLSNTSTVSNIS
APQNPSITAAVFGASSTPNLYASSSSNGPASTFAFPSPAPATTSTCNHGLFGCMPSVAQT
GTPDAVQTTTSSSGSTTPLPLEEMRRLQVIIERNSSMHSREENDRKVVMSFDIIKRIKVL
ATKD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgattcccttccgtttcctggctggggttcaactcactcaggtgggagttcg
tctggaagcccattttattcccaatcgttcttggagcatgagtggcgcaacaacaacgct
tctgctcccaatctctgcaggtgcggtgaaaatggtttgtttggagcagcgcaatcttct
tggccctttcctccttttggagtaccttatactcctggtcccagtagctcattgtcacca
attactggtttctggatgtttgttcccttcagttcgacatgcatcccagcctttgcctct
gctagcacaccagcttttggtgcaacaggcttctcgccctttgctagaacgataagtcct
atgttcggaagcagaggagatgggtcttatggtggatcatttggagcttcaaacacccca
gcttttggttcatctagctccaccgtcggtacttcaagcaaccaagcttttggtgcttca
agtactattggttttggttcatttagtagtacacaacatttgagctcttcaccaacttcc
gcatttacccaatcaagtttcagattcagtagcagcccatttggtgcttcgtctcctttt
ggatcacagtgttttccatttgtaagtcaatcaacaacaattgggaacaccgggcagtca
gcttttggtggccaacaacgcaagggtagtagcgtggcttcatacactgcaactcctgca
gttgatgatggtaggaaagtggagtcaatatctgcaatgccagaatataaagacaaaagt
cacgaagaactccgtgtggaagattataaattggggaaaggtgttcaatttcctgccggt
gggagtaccattgacatttctacctcacagccgaatcctttgcatcctgcaccatcactt
cttcaaccatcttcaagcaacccaattgcttttggagctcctctgcggctagttctacaa
gcaacccaattgcttttgcctttgttcgtgtcatctcagcctcttcagagtagtggttca
gtcttcaacattgttagtcaaactccgcaaggcaacacaggtggttcgaccggaattctt
ggacagaatgggtttgaaagcttttcatcaatccctgcgtttggtcaattaagttatatg
tccggttgctgccagttatgcgcttcatgtggagctcaatcaacaactggaaacactgct
ctggggaagccagtttctgagcgtcggccggatgaaaaattccactcaatatcgtcaatg
ccaatttatggagacagatctcacgaggaaatcagatggcagaattatcaattgggggat
aaaggtggaccggctcttggtggtgtgactcactttaccttgcttaccaagaaacctgca
ccgacatttgctcaaacatctttgagtctgtccaatacctctactgtatctaatatatct
gctccacaaaatccatccattactgctgcggtctttggagcctcatctacacccaatctt
tatgcatcttcatcatcaaatggacccgcatctacatttgcatttccttctccagctcca
gcaacaacttcgacatgtaatcatggcctattcggttgcatgccgtctgttgcacaaaca
ggtactcctgatgccgtacaaactacgacttcctctagtgggtctacaacaccccttcca
ctagaggaaatgaggaggctgcaggtgatcattgaaagaaattcaagcatgcatagtcgt
gaggaaaatgatcgaaaggttgttatgagctttgacataataaagagaattaaagttctg
gcaaccaaggattaa
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