Pyrus communis (pear): 137710266
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Entry
137710266 CDS
T10779
Name
(RefSeq) pectate lyase 1-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137710266
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137710266
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
CILP_C
Motif
Other DBs
NCBI-GeneID:
137710266
NCBI-ProteinID:
XP_068305293
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Position
12:complement(26232912..26236908)
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AA seq
394 aa
AA seq
DB search
MASHPGNLNANMRWLFLGLFIVIIVGFAPNPILAKKTKVDGMKLNVIDSCWRWNSNWRSD
RQELASCSVGFAGKMSNNAGSDVKYYQVTDPSDNALDPTPGTLRYGVTMIRGKKWITFRR
DMRIQLQKPLLISSFTAIDGRGATVHIAGNACLVVFKASDVIIHGLRIHHCRSQPASSVM
GPDGKIRQLGQVDGDAIRLVTASKVWIDHNTLYECQDGLLDVTRGSSLITISNNWFRDQD
KVMLLGHDDGYVRDRNMRITVVYNHFGPNCNQRMPRIRYGYAHVVNNLYRKWSQYAIGGS
MNPSVKSEANLFIAPKSLNNKEITWRKDSIENKNSWIFYSVGDIFENGASFVQSGTGGAK
PHYNREQTFGVVDAKSVRSLTRSSGALTCIKSRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcatcccggaaatcttaatgccaatatgcggtggttgtttttgggccttttc
atcgtcattatcgtcggcttcgctccaaaccctattttggctaagaaaacaaaagttgat
ggaatgaaattgaacgtgattgacagttgctggagatggaactcgaattggagaagtgac
cggcaggaacttgcgtcatgttcagtgggatttgctgggaaaatgagcaacaacgcagga
agtgatgtcaaatactatcaagtcacggaccctagtgataatgcgttggaccccacacca
ggaactttgagatatggggttaccatgatcagagggaaaaagtggatcacctttcggagg
gacatgcggattcagctccagaaacctcttctcattagtagttttactgccattgatgga
agaggtgctactgttcacattgccggcaatgcgtgtttggtagtctttaaggcaagcgat
gtaatcatccatggactacgaatccaccattgtcgatcccaaccagcaagctcagttatg
ggtccagatggaaagataaggcaactagggcaggtcgacggagatgctatcaggttggta
actgcatcaaaggtttggatagaccacaatacactctacgagtgccaggacggccttctc
gatgttactcgaggatctagccttatcaccatctccaacaattggttcagagaccaggac
aaggttatgcttcttggccacgatgatggctacgttcgggacaggaacatgaggatcaca
gtagtctataaccattttggacccaactgcaaccaaagaatgccaaggattcgctatgga
tatgcacatgtcgtgaacaacctctacagaaaatggtcacagtacgccatcgggggaagt
atgaatcctagcgttaagagtgaagccaacctctttattgcaccaaaatcgttaaacaat
aaagagatcacttggaggaaagacagcattgagaacaagaactcgtggatattttactct
gtgggagatatcttcgaaaatggggcttctttcgtccaatcaggcacaggtggagcaaag
cctcactataacagggaacaaactttcggagttgttgacgccaaatccgtccggtcattg
acaaggtcatcaggcgctttaacatgcatcaaatccagatgctaa
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