Pyrus communis (pear): 137710314
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Entry
137710314 CDS
T10779
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcox Pyrus communis (pear)
Pathway
pcox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137710314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137710314
03036 Chromosome and associated proteins [BR:
pcox03036
]
137710314
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137710314
Coactivators
SAGA/TFTC/STAGA complex
137710314
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137710314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
137710314
NCBI-ProteinID:
XP_068305348
LinkDB
All DBs
Position
12:complement(686924..696765)
Genome browser
AA seq
959 aa
AA seq
DB search
MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDASASQPSDSDSAILSQGSNNTS
SQPLPQFQTTGQDESTACEMQHDEKIAQPRELHSYEMELKQQGSVAENMQLKSDASQELG
HFSLSQKQPQGDLQQGQAEQKSLQVHETTGTPISGKIPVSKQEQDITPTPQSESQYLKLQ
RMSSQQSMITEQPSNPMNRSKQVPFGLLLPVLLPQLDKDRAMQLNTLFGKLKNNEISKDA
FVRHIRSVVGDQMLKLAVMKVQSQPGPKHQLLPQASVQQQSPRMPSASAGSTQFADPRSF
ALNQRGTNSPTDPSHIPSSTVQLQSDSSHSVIENSAKKLREAERQSDSHGMQVSQMSSSS
VVAGNQERERSSGPMQILNKQQQQLQYPQSSYSMYGSTGGNYHPYTGTSINTLPLKQQPH
DSQLRQIPQHQSMGSAQSGGEAKGGNVMGVSNLERQNSMKDPSRLQGGSLSHFTNNSTLQ
QNIAPWQSSNKEPHSGPLSSIPFAKQELTDQTAEQQHKPPLSNSQELPSAAKLEQGNGSP
GISMDEPLDKQSSRMGFPASVSIGASSSTSTVPPNSVSSSVTTQADPNVLLGHRIPSGTS
PAGISNRAPPKKPSVGQKKPLEALGSSPPPSSKKQKVSGTFLDQSIEQLNDVTAVSGVNL
REEEEQLFSGPKEDSRASEASRKFVQEEEERLILQKEPLQKKLAEIMIKCGLKSVSNDVE
RCLSLCVEERMRGLINNLIRLSKQRVDAEKPRHRTIITSDVRQQVMNLNQNAREEFEKKQ
AEAEKLRKLNEPEVSNGVDGDKDKDEGRSKSFKPNKEEDDKMRTTAANVAARAAVGGDDM
LSKWQLMAEQARQKREGGIEVASGSQPGKDVNRKPTLSAGRTMKDNQEAEKRSGGTPVAS
AAGTIRKCGKNQVNVPQTKVARSISVKDVIAVLEREPQMSRSTLIYRLFERVQSNTTGE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggacccctccattatgaagaagctgctcgaagacgatgaggacgaaaccatgcattcg
ggggcggatgtggaggccttccaggctgccctcaatagggacattgaaggagatgcctct
gcttcccagccatctgattccgactccgcgattttgtctcaaggaagcaataatacttct
agtcagccattaccacagttccaaacaactggtcaggatgaaagtacagcttgcgaaatg
caacatgacgaaaaaattgcacaaccacgagaactgcattcatatgaaatggagctaaag
caacaaggatctgttgctgaaaatatgcagctaaaaagtgatgcctcacaggaacttggt
cacttttctttgtcccagaagcaaccccaaggtgatcttcaacaagggcaagcagaacaa
aaatcccttcaggtacatgaaacaactggcacgccgatttccggaaaaattcccgtctcc
aaacaggagcaggacattacacctactccgcaaagcgaatctcagtacttaaagcttcag
aggatgagcagtcaacagtcaatgatcactgagcagccaagcaacccaatgaatcgtagt
aaacaagtaccatttggcctgttactacctgtcctattgccccagcttgataaggacagg
gccatgcaacttaatactctatttggcaaactcaagaataatgaaatctcaaaagacgct
tttgttcggcacattagaagtgttgttggggaccagatgctcaaattggcagtaatgaaa
gtacaatcgcagccaggtcctaaacaccagttactgcctcaggcttcagtgcagcaacag
tctcctaggatgccatccgctagtgcaggttccacacagttcgctgatcctcgttcattt
gcacttaatcagagaggcaccaactctccgacagacccatcgcacattccatcttcaaca
gttcaactgcagtctgattcaagccattcagtcattgaaaacagtgctaaaaaactgcgg
gaggcagaacgtcagtcagactctcatggaatgcaagtaagccaaatgtcttcttctagt
gtggtagctgggaatcaagaaagggagcgctcatcaggtcctatgcaaatacttaataaa
cagcaacaacagttgcagtatccacaatcatcctattccatgtatggaagtactggtggt
aattatcacccatatacggggacaagtatcaatacattgcctctcaaacagcaacctcat
gattcacaacttagacaaataccacaacatcaaagcatgggttcagctcagtcaggtggg
gaagcaaagggagggaacgtcatgggtgtgtccaatttggagaggcaaaattcgatgaag
gaccctagtagactgcagggtggatctctttcgcactttacaaataattcaactttacaa
cagaatatagctccttggcaatcctcaaataaagagccacattctggtcctttgtcatca
attccttttgcaaaacaggaactgactgatcagactgccgagcagcagcacaaaccccca
ttatctaattcacaggaattgccttctgctgcgaaacttgaacaggggaatgggtcacct
ggaatttcaatggacgagccgttagataagcaatcttcaagaatggggtttccagcatct
gtaagcattggggcttcatcttctacaagcacagtgcccccgaattctgtttcttcttcc
gtaacaacgcaagctgatcccaatgtcttgttaggccatcgaataccctctggaacttct
cctgctgggattagtaatagagcacctccaaaaaagccttctgttggccaaaagaagcct
cttgaagcacttggttcttccccacctccgtcaagtaagaagcaaaaggtatccgggacc
tttttggatcaaagcattgaacaactgaatgatgtgactgctgttagtggagttaatctt
agggaagaggaagagcagctgttttctgggcccaaggaggatagtcgagcttcagaagca
tctcgaaagtttgttcaagaagaagaagagaggttgattttgcagaaggaacccttgcag
aaaaagttggcagaaattatgatcaaatgtggattgaaaagtgtaagcaatgatgtggag
cggtgcttgtcactgtgtgtggaggaaagaatgaggggactaataaataatctgatcaga
ctgtcaaagcagcgagttgatgctgagaagccgagacaccgcactattattacctctgat
gttcggcagcaagttatgaatctcaaccagaatgccagggaagaatttgaaaaaaagcaa
gccgaggcagaaaagcttcgaaagcttaatgaacctgaggttagcaacggagttgatggt
gataaggacaaagatgaaggtcgttcgaaatcatttaagccaaacaaagaggaagatgac
aaaatgaggacaacagcagcaaatgttgctgcccgagctgctgttggaggagatgacatg
ttgtcaaaatggcaacttatggctgagcaagcccggcaaaaacgtgaaggtgggattgaa
gtagcatctgggtcccagccaggtaaagatgtaaaccgcaagcctacattatcagctgga
agaactatgaaggacaatcaagaagcagagaaaaggagcggtggaactcctgttgcttca
gctgctgggactattagaaaatgcggaaagaaccaagttaatgtgcctcaaacgaaggtg
gctcgtagtatatctgttaaggatgtgattgctgtcctagagagagaacctcagatgtcg
agatctactctgatatatcgcttgtttgagagagttcaatctaacaccactggtgaataa
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