Pyrus communis (pear): 137710572
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Entry
137710572 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137710572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137710572
03009 Ribosome biogenesis [BR:
pcox03009
]
137710572
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137710572
Spliceosome [BR:
pcox03041
]
Complex A
U1 snRNP components
U1 related factors
137710572
Complex B
137710572
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Helicases
137710572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137710572
NCBI-ProteinID:
XP_068305738
LinkDB
All DBs
Position
12:21596944..21601100
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AA seq
642 aa
AA seq
DB search
MYASDNRYADVNSYRERRSDLMGPAPAVAPQAGTAYGRGGGAAPYGGPPAAVASYSARVG
GPTSGPGDFNGYPPFQPPSERFNIGQGGGNGSFGGRASNGHVGGGRGRGGIGGGGRFGGG
GRGFDGGRGGGRSFGGIRGGGAGFGGGRGVGGRGGGRHGGSSRGDLDNIMLPKQDFGNLV
PFEKNFHAESPSVRAMSEHDVMVYRTRREITTEGHDIPKPIQMFEDANFPDYCLEVIAKL
GFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAVVHISAQPRLAQGEGPIALV
LAPTRELAVQIQEEALKFSLRSNIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDML
EAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQTRPDRQTLYWSATWPREVESLARQ
FLRNPYKVIIGSASLKANQSINQVVEVVTEVEKYNRLIKLLKEAMVGSRMLIFVETKKGC
DHVTKQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRNPIMTATDVAARGLDVKDIKCVI
NYDFPSSLEDYVHRIGRTGRAGAAGTALTFFTHANAKFTRDLIKILQEAGQVVSPALAAM
ARSSGSFGGSGGNFRNGGRGGFGNRGVISGSNTVPIGYKRPW
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctccgacaaccgatacgccgacgtcaactcctaccgtgagcgccgcagtgac
ctaatgggtccagcgcctgcggtggcgccacaggcaggcaccgcctatggccgtggcggt
ggggcagctccgtatgggggcccgccggctgcggttgcttcatattcggcaagggtgggt
ggaccgacatcgggtccaggagactttaatgggtacccgccgttccagcccccttccgag
cggttcaatatcggccaaggtggtggtaatgggagctttggtggtagagcatcgaatggt
catgttggtggtggaaggggtcgtggtggtattggtggtggtgggagatttggtggcggt
ggcaggggttttgatggaggccgtggtggcggtaggagctttggtggtattcgtggtgga
ggtgcggggtttggcggtgggcgtggagttggtggaagaggaggaggtaggcatggtggc
tcgtcaagaggagacttggataatattatgcttcccaagcaagattttggaaacttggta
ccttttgagaagaacttccatgctgaaagtccttctgtgagggcaatgtcagaacatgat
gttatggtgtatcgtacgaggcgggagattaccaccgaagggcatgatatcccaaaaccg
attcagatgtttgaggatgcaaatttccctgattactgcctagaggtgattgcgaaattg
ggttttgttgaaccaacaccaattcaggctcaaggatggccaatggcattaaagggtaga
gatttaattggcattgccgagactggttctggtaagactttgtcttatctgctgccggct
gtggtacatatcagcgcacagcctcggttagctcagggagaaggtcctattgcgttagta
ttagcacctactcgagaattggcagttcaaattcaagaggaagctttaaaatttagttta
cgttccaatattaggagtacttgcatttatggtggtgctccaaaaggaccccaaatacgc
gatcttaaaagaggggttgagattgtgatagctacgcctggccgactgatagatatgttg
gaagctcagcatacaaatttgcgaagagtgacttacctagttttagatgaggctgatagg
atgttggacatgggatttgagccgcagataaggaaaattgtttctcaaacccgaccagat
cggcagacattgtattggagtgccacgtggccaagggaggttgaaagtttggcaaggcag
tttttacgtaacccatataaggtaatcattggatcagcaagccttaaagcaaaccaatcc
ataaaccaagttgttgaagttgtgacggaggtggagaaatacaataggctgatcaaattg
ctcaaagaagcgatggttgggagccgaatgctgatttttgtggagacgaaaaagggatgc
gaccacgttactaaacaattgaggatggatggatggccagctctatccatccacggtgat
aaaaaccaggccgaaagagactgggtcttggctgagtttaaaagtggcaggaatcctata
atgactgccactgatgtggctgcacggggtcttgatgtgaaggacataaaatgtgtgatc
aattatgattttccatcaagccttgaggattatgttcacaggattggacgaactggacgt
gcaggagcagcaggaactgctttaacttttttcacgcacgcaaatgcaaaattcactagg
gatctaatcaagattcttcaagaagcaggtcaggttgtgagccctgcattggctgcaatg
gcccgatcaagtggtagtttcggaggatccggtgggaacttccgcaatggaggacgagga
gggtttgggaaccggggcgtgatttctggttcaaatactgttcctatcgggtacaagaga
ccatggtag
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