Pyrus communis (pear): 137710784
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Entry
137710784 CDS
T10779
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137710784
09123 Folding, sorting and degradation
03018 RNA degradation
137710784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137710784
03041 Spliceosome [BR:
pcox03041
]
137710784
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137710784
mRNA degradation factors
5'-3' decay
Lsm complex
137710784
Spliceosome [BR:
pcox03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137710784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
137710784
NCBI-ProteinID:
XP_068306010
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All DBs
Position
12:complement(26249524..26253293)
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AA seq
98 aa
AA seq
DB search
MSSGPGLESLVDQTISVITNDGRNIVGVLKGFDQSTNIILDESHERVFSTKEGVQQLVLG
LYIIRGDNISIVGELDADLDSTVEWSKMRAYPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtggccctggtcttgagtcactcgttgatcaaacaatttcagttatcacaaat
gatggacggaatattgtgggagtcttgaaaggttttgaccagtctactaatattattctt
gatgaatctcatgaacgtgttttttctacaaaggagggtgttcagcaactcgtgttgggg
ttgtatataatcagaggtgacaacataagcattgttggggaattagatgcagatcttgat
tctactgttgagtggtcgaagatgagagcttatcccctcaagcctgtcatccactga
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