Pyrus communis (pear): 137710817
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Entry
137710817 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137710817
03009 Ribosome biogenesis [BR:
pcox03009
]
137710817
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137710817
Spliceosome [BR:
pcox03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137710817
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
90S particles
Helicases
137710817
Pre-60S particles
137710817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
AAA_22
DUF7355
Motif
Other DBs
NCBI-GeneID:
137710817
NCBI-ProteinID:
XP_068306054
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All DBs
Position
12:24314148..24318283
Genome browser
AA seq
596 aa
AA seq
DB search
MTDQNLHAPPEDETKKKKRKRNRAKKPAESAGTEQPEPENTKGEQAKGESEKKRKKVKKL
KGEEPEAQSPVEDNEEEEEEGEEAMEEEEDEERKVRSGGGGTGIMSTESFASLNLSENTY
KAIEEMKFQYMTQIQARAIPPLLIGKDVLGAARTGSGKTLAFLIPAVELLYNTHFAPRNG
MGVVVICPTRELAIQTHAVAKDLLKYHSQTLGLVIGGSARRGEAERIVKGVNLLVATPGR
LLDHLQNTKGFIYKNLKCLVIDEADRLLEANFEEEMKQIVKILPKDRQTALFSATQTKKV
EDLVKLSFRKDQKPIYVDVDEGRSKVTNEGLEQGYCVVPSAKRFLLLYSFLIKNTSKKVM
VFFSSCNSVKFHSELLRYVNVDCFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGL
DIPAVDWILQFDPPDEPTEYIHRVGRTARGEGAKGKALLFLIPEELQFIRYLKAANVPVK
PYDFNEKKLKNVQSKLEEMVQNNYYLNKSAKEAYTSYLLAYNSHSMKDIFNVHRLDLQAV
AASFCFSNPPKVHLNLDSNKSKFKKKIRKEAGRNGFSESNPYGNRKGGDDRQFVRH
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccaaaaccttcacgcgccgccggaggacgagacgaagaagaagaagcgcaag
agaaacagagcgaagaagccggcggaatcggcgggtacggagcaaccggagcccgaaaat
actaagggggaacaggctaagggcgagagcgagaagaaaaggaagaaggtgaagaaattg
aagggagaggaaccggaggctcagagccctgtggaggacaatgaggaagaagaagaggag
ggggaagaagcaatggaggaggaggaggatgaggagaggaaagtgagaagtggcggcgga
gggactgggattatgagcacggagtcgtttgcttcgttgaatttgtctgagaacacttac
aaggccattgaagaaatgaagtttcagtatatgactcagattcaagctagagcaatccca
ccgctcttgatcgggaaagatgtcctcggagctgcaaggacagggtctggtaaaactctt
gcttttctaataccagctgtggagctgctatataacacacattttgctcctcgtaacgga
atgggtgttgttgtgatttgcccaacacgggaacttgcgatacagacccatgctgtggca
aaggaccttctaaagtatcactctcagactcttggcttggtaattggaggttcagctagg
agaggggaagcagagcgtattgtaaaaggagtaaatttattggttgcaacccctggtcga
cttcttgaccatcttcagaataccaaaggattcatatataagaacttgaagtgcctcgtg
attgatgaagctgacaggttattggaagcaaactttgaggaggaaatgaaacagattgtc
aagattctgccaaaggataggcaaacagctttattttcagcaacccaaaccaagaaggtt
gaagatcttgttaagttgtcgtttcgaaaagatcagaaacctatctacgttgatgtggac
gaggggaggtcaaaggtcaccaatgaagggctggaacaaggctattgtgttgtgccaagt
gctaagagatttctactcttatattctttcctgataaagaatacgtctaagaaagttatg
gtcttcttctcatcttgtaactcagtgaaatttcactccgaacttcttagatacgttaat
gtggattgctttgatatccatggaaagcaaaagcagcagaagaggacaactactttcttt
gacttttgcaaagcagagaaaggaatcttactttgtactgatgttgctgctcgtggacta
gatattcctgctgtggactggattttgcagtttgatcctccagatgaaccgacggaatat
atccatagggttggtcgaacagctcgaggggaaggtgcaaaaggaaaggcactacttttc
ctcattcctgaagagttgcaattcattcgctatttgaaggctgcaaatgtccccgttaaa
ccatacgattttaatgaaaagaagctgaagaatgtgcagtctaaactggaggagatggtt
caaaacaattactacctgaataaatcagcaaaagaggcgtatacatcttatctattagca
tataattcacactctatgaaggacatctttaacgtacaccggcttgatctgcaggcggtt
gcagcttcgttttgcttttctaatccacccaaggtgcatttgaacctagacagcaacaaa
tcaaagttcaagaagaagatccgtaaagaagcaggtcgaaatggattcagtgagagcaat
ccttacggcaatcgaaaaggcggagatgatagacaatttgtaaggcactag
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