Pyrus communis (pear): 137710930
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Entry
137710930 CDS
T10779
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pcox Pyrus communis (pear)
Pathway
pcox03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137710930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137710930
03036 Chromosome and associated proteins [BR:
pcox03036
]
137710930
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137710930
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137710930
PBAF complex
137710930
GBAF(ncBAF) complex
137710930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
137710930
NCBI-ProteinID:
XP_068306197
LinkDB
All DBs
Position
12:complement(20454544..20457687)
Genome browser
AA seq
542 aa
AA seq
DB search
MNNNNDQSKNVGVPPHFGNSGPVPQPMAMNHQPNLLTQSQPPTQGGAHFPGHFQLSEPQA
QALAQAQYVNAHAQAQTQAAHAQFVQLQAQAQSRSQLHNVNTSNAGASSPSLATPSTGTA
KRANQRPPSRPPGSSSANMGSPFKTMELTPAASRKKRKLPDKQIPDKVAALLPESGLYTQ
LLEFEARVDAALARKKMDIQESLKCPPRVQKTLRVYVFNTFANQTQTIPEKTNAEPPSWS
LKIIGRLLEDGRDPVMAGLTPKSRAKFSSLFKKVTIYLDQTLYPDNQVILWESSRSPALH
DGFEVKRKGDKEFTVILRLEMNYVPEKFKLSPALHEVLGIEVETRPRIIGAIWHYVKARK
LQNPNDPTFFVCDPPLQKIFGEEKMKFSMVSQKISQHLTPPQPIHIEHKIKLSGNCPAGT
TCYDILVDVPMILEKEMSAFLGSTERSKEIDACDELICASIKKIHEHRRRRAFFLGFSQS
PAEFINTLIASQSKDLRLVAGDASRNAEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPG
ST
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatgatcagtccaagaatgtgggcgtgccacctcactttggcaattct
gggccggtgccgcaacctatggccatgaatcaccagcctaatcttctcactcaatcgcag
cctccgacacaagggggagctcattttccgggacactttcagttgtctgagccgcaagcg
caggcacttgcacaggcgcagtatgtgaatgctcacgcacaagcccaaactcaagctgcc
catgcccaatttgttcagttgcaagctcaagctcagtcacgttcccagttgcataatgtg
aatactagtaatgctggtgcttcatcaccctctttggcaacgcctagcacaggaactgct
aagcgggcaaaccagaggccgccttctcggcctccaggttcatctagtgccaacatgggt
tcaccatttaaaaccatggagctcaccccagctgctagtagaaagaagcgaaagctacct
gataaacaaataccggacaaagtggctgcacttctgccagaatccggtctttatactcag
ttgcttgaatttgaagctcgtgttgatgctgctttggcaaggaagaagatggacatccag
gagtcccttaaatgtcctccccgtgttcaaaaaacacttagagtatatgtattcaacacc
tttgcgaatcagacacaaacaattcctgagaagacaaatgcggaacccccttcatggtca
cttaagataattgggaggttactggaagacgggagggatcctgtgatggctggattgaca
ccgaaatcaagggcaaaattttcatccctgttcaagaaagttaccatatacttggaccaa
accctctatccagataaccaagtgattttatgggaaagttcccgttcacccgctcttcat
gacggctttgaggtgaaaagaaaaggggataaggagtttactgtaatactaagactagag
atgaattatgtacctgagaaattcaaactttcaccggccctccatgaagttctgggaatt
gaggtagagacccgacccagaattataggtgctatttggcactatgtcaaggccaggaag
ttgcagaacccgaatgaccctacgttctttgtgtgtgatccaccacttcagaagattttt
ggggaagagaagatgaagttttcaatggtttcacaaaagatatcacagcatttaacgcca
ccacagcctatacatatagagcataagataaaactttctggaaattgtccagctggaact
acttgctatgatatactggttgatgtacccatgatattagagaaggagatgtctgcattc
ttgggaagcaccgagaggagcaaagagattgatgcttgtgatgaattgatatgtgcatcc
ataaaaaaaatccatgaacatcgacggcggcgggctttctttcttgggttcagtcaatct
cctgcagagttcattaataccttgattgcttcccagagcaaggatctaaggcttgttgct
ggagatgctagccgtaatgcggaaaaggagcgccgttctgatttctataatcaaccctgg
gttgaggatgctgttattcgttacctgaaccgaaagtcagccggaagtgatgctcctgga
agcacttga
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