KEGG   Pyrus communis (pear): 137711160
Entry
137711160         CDS       T10779                                 
Name
(RefSeq) protein SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137711160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcox03019]
    137711160
   04131 Membrane trafficking [BR:pcox04131]
    137711160
Messenger RNA biogenesis [BR:pcox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     137711160
Membrane trafficking [BR:pcox04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    137711160
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd Beta-prop_IFT140_1st DSE1_N WD40_Gbeta
Other DBs
NCBI-GeneID: 137711160
NCBI-ProteinID: XP_068306469
LinkDB
Position
12:17298867..17302275
AA seq 326 aa
MEKPLVALDKGTICSSWNYSGQRLASGSVDGTLAIFDSRDSCSSSFSCTSKSKVHETAGI
VKIAWVPPEFGDAVACVCADGTLSLWEEVAEDAQPLQWKLCTSFNSGSAQLLDTQFGVSP
AGLKMVTAYSDARVKVYELLDPLELKNWQLQAEFQNVIDSVSTVGHAICLSASISWNPQR
GESQESSFVLGFNSNTPQLNSAKVWEFDQAHQRWLPVAELASPGDNGDQVYAVAWAPNIG
RPYEVIAVATHKGISIWHLGLNPDLDGRLSLEKIAQLSGHKGEVWQMEWDMSGMTLATTG
NDGAVRLWQSSLNGVWHEEATFEPTW
NT seq 981 nt   +upstreamnt  +downstreamnt
atggagaaaccgttggtggcgcttgataaaggcaccatctgctcgtcgtggaactactcc
ggccagagattagccagtggttccgtcgacggaaccctcgccatcttcgactcacgcgac
tcttgttcttcgtccttctcctgcacctcaaaatccaaggtgcacgagactgctggaatt
gtgaaaattgcttgggttccaccggaattcggcgatgcagtggcgtgtgtatgtgcagat
gggactttatcattgtgggaggaagttgctgaagatgcacaacctcttcaatggaagctg
tgcacaagctttaatagcggttcagctcaactgctagatacccaatttggagtctcaccg
gcaggtttaaaaatggttactgcatattcagatgcccgtgtcaaggtctatgagctactg
gatcccttggaactgaagaattggcagcttcaggctgaatttcagaatgttattgattcg
gtgtctacagttggccatgccatatgcttatctgcatctatatcttggaatccacaaaga
ggagaaagccaggaatcaagttttgttttgggtttcaattcaaacacaccacaacttaat
tccgccaaggtatgggaatttgatcaggctcatcaaagatggctcccagttgcagagttg
gcttcgcctggtgacaatggtgatcaggtctatgcagttgcatgggcaccaaacattgga
aggccatatgaggtaatcgctgttgccactcacaagggaatatcaatatggcatcttggg
ttaaaccctgacttggatggaaggctctcattggagaagattgcacaactttcaggtcac
aaaggcgaggtctggcagatggaatgggacatgagtggaatgacgttggcaaccaccgga
aatgatggggctgtacggttgtggcagtctagtttgaacggagtttggcatgaagaggct
acttttgaacccacttggtag

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