Pyrus communis (pear): 137711168
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Entry
137711168 CDS
T10779
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137711168
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137711168
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
DUF4834
Motif
Other DBs
NCBI-GeneID:
137711168
NCBI-ProteinID:
XP_068306477
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Position
12:22931466..22933678
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AA seq
441 aa
AA seq
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MAMEAAYKLNVFILCIFIVAITIPATVTANIAVFDEHWQGRAKEAKQAANKAYNKNPAEV
TGSFNKEVHNTFDSMNNTRRNLKEKYKGPCLATNPIDCCWRCDPNWETNRKKLADCAQGF
GHKTTGGKAGEIYVVTDNSDNDLVNPKPGTLRHAVIQTGPLWIIFAHDMKIKLSEELMVT
SDKTIDARGANVHIQDGGQITLQFVKNVIIHNLHIHDNKAGNGGMIRDSVNHYGQRTRSD
GDGISMYGASNVWIDHVSASNCEDGLIDAIQGSTAITISNCHFTNHNDVMLFGSSDSNSQ
DEVMQITLAFNHFGQGLTQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFI
APLNEASKEVTKREYAAENVWKSWNWRSENDLMMNGAFFVESGSPIRNLPEADMIQAKPG
TFVAKLTRFAGPLKCIKGKPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagctgcttacaagctaaatgtgtttattttatgtatatttattgttgca
ataacaattccggcaacggtgacagccaacattgcggttttcgatgagcactggcaaggt
cgagctaaagaggcgaagcaggccgccaacaaagcctacaataaaaatcctgcagaagtc
actggaagtttcaataaggaagtccacaacaccttcgatagcatgaacaatacgcgaagg
aacttaaaagagaagtacaagggtccatgcctggctacaaaccctattgattgttgctgg
agatgcgatccaaactgggaaacaaatcgcaagaagctggctgattgcgcccaaggcttt
gggcacaagacgacaggaggcaaggctggagaaatatatgtggtgacagataactccgac
aatgacctcgtgaacccgaaaccagggacactacgccacgctgtgattcaaactgggcca
ctctggatcatattcgctcacgacatgaagataaagctaagcgaagagcttatggtgacg
agtgacaagacgattgacgcgcgaggtgctaatgtgcacattcaagacggtggccaaatt
acactacagtttgtgaagaatgtgatcatccataacctccacattcacgataacaaggct
ggaaatggtggcatgattagggactcggtgaatcactatggacaacgcacacgtagtgat
ggtgatggtatatcaatgtatggagcctcaaacgtttggatagaccatgtctccgcgtca
aattgcgaggatggactcattgatgccatccaggggtctacagccatcaccatatccaat
tgtcacttcaccaatcataatgatgtgatgttatttggttcaagtgatagcaactctcag
gatgaagtgatgcagataactcttgctttcaaccatttcggtcaggggttaactcagcgt
atgccaaggtgccggtgggggtttttccatgttgtaaacaacgactacacgcattggctt
atgtacgctattggtggcagccaacatcctaccataattagccagggcaaccgcttcatt
gctccgttaaatgaagcgagtaaagaggtgactaagagggaatatgcagcagagaacgtg
tggaaatcgtggaattggagatcggagaacgatcttatgatgaatggagcattctttgtt
gaatctggtagcccaatcaggaatctcccagaggcggatatgatccaggcaaagcctggg
acattcgtggcgaagctcacacgctttgcaggtcctcttaaatgcattaaagggaagcca
tgctag
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