Pyrus communis (pear): 137711384
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Entry
137711384 CDS
T10779
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03030
DNA replication
pcox03420
Nucleotide excision repair
pcox03430
Mismatch repair
pcox03440
Homologous recombination
pcox03460
Fanconi anemia pathway
Brite
Transcription factors [BR:
pcox03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137711384
DNA replication proteins [BR:
pcox03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137711384
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137711384
MMR (mismatch excision repair)
137711384
DSBR (double strand breaks repair)
HR (homologous recombination)
137711384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137711384
NCBI-ProteinID:
XP_068306720
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Position
12:23825483..23828840
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AA seq
635 aa
AA seq
DB search
MAKLGPTPDAISTILANKSPDESVELPEIVVQVCDLTPRGKSFMFTATDGTAKLKGMLSS
RLGPQVTSGEIQNLGLIRVLGYSVNFNSNLSENYLLVTKCEVVSPALEAEVKNEVKREDV
GIILNPKQEIVSESAAQIVHEQAGKVKKEDVGVILKPKQEMVSKSAAQIVHEQAGNMAPS
ARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGTMRTYKNARGEGCVFNVELTDQDGTQIQ
ATMFNEAAKKFFEKFELGKVYYISKGSLRVANKQFKTVQNDYEMTLNENSEVEEASNEAA
FVPEIKFNFVPIDMLGPHVNGKELVDVIGVVQNVSPTMSIRRKSNNESIPKRDITIADET
KKTVVVSLWGELATGVGQELLDIADQSPIVAIKSLKVGDFQGVSLSTLSRSTILVNPELP
EAQKLRSWYDSEGKGSSLASIGSSMNPSAKNGGRSMYSDRVTLSHISEDPSLGEDKPAFF
SVKAFISSIRPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYILVARVADV
SGETYLSLFNDEAERVLGCSADELDKLKSKDGDENEFQQKLKEATWVPHLFRVSVTLNEY
NNEKRKRITARAVAPVDFAAESRFLLEDISKLKAS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttagggccgaccccagatgcgatttcgaccatcttggcgaacaagtcgccg
gacgagtccgttgagctgccggagatcgtggttcaggtctgcgatctcacccccaggggc
aagtctttcatgtttactgctactgatggaactgcgaagctaaaggggatgctctcctcg
cggctgggcccccaggtcacctctggggagattcagaatctgggtctcattcgcgttttg
ggttactctgttaatttcaattcgaacttgtctgaaaactatctgcttgtaacaaaatgt
gaggtggtttcgcctgcgcttgaggcagaggtgaaaaatgaggtcaaaagggaagatgtt
gggattatattgaatcccaagcaagaaatagtttcagaatctgctgcccaaattgtgcat
gagcaggctgggaaggtcaaaaaggaagatgttggggttatattgaagcccaagcaagaa
atggtttcaaaatctgctgcccaaattgtgcatgagcaggctgggaatatggctccgtct
gcgagaatggctatgacacgaagggttcacccgctcgtttccttgaacccttaccaagga
aattggaccataaaggttcgtgttacaaacaagggtaccatgcgtacctacaagaatgct
agaggtgaaggttgcgtcttcaatgtggagttaacggatcaagatggtacacaaattcaa
gcaacaatgttcaatgaagctgcaaagaagttctttgagaagtttgagttagggaaggtt
tattacatttcaaagggatctctgagggttgctaacaagcagtttaagacggtgcaaaat
gactatgaaatgactttgaatgagaattctgaggtggaagaagctagcaatgaagcagct
tttgttcctgaaataaaattcaattttgtgcccatcgatatgttgggtccccatgttaat
ggaaaggagcttgtggatgttattggggttgttcaaaatgtgtctcctacaatgagcatt
agaaggaagagcaacaatgagagtattccaaagcgtgatatcaccattgctgatgaaaca
aagaagacagttgtggtttctttatggggtgagcttgcaactggtgtaggccaggagttg
cttgacattgctgatcaatctcccatagtcgctatcaagtccctcaaagttggagacttc
caaggtgtatcattgtcaacattgagcaggagcacaatactagttaatccagagttgcct
gaagcacagaagttgaggtcctggtatgattctgaaggcaaaggatcttcattggcctcc
attggctctagtatgaacccatcagccaagaatggaggaaggtccatgtactctgacaga
gtcaccctgtctcatatatccgaagacccgtccttgggtgaggataagcctgcgtttttc
agtgttaaagcattcataagttcgatcaggcctgatcagacaatgtggtaccgtgcttgc
aaaacttgcaacaagaaagtgactgaagctattgggtctggttattggtgtgaagggtgc
cagaaaaatgatgaagaatgcagtctaaggtatatattagttgcaagagttgctgatgta
agtggggaaacgtatctttctcttttcaatgatgaagctgagagggtcctcgggtgctct
gcagatgaactggacaaattgaaatcaaaggatggagacgagaatgaattccaacagaag
ctgaaagaagcaacttgggttcctcatctttttagggtcagtgttactctgaatgagtac
aataacgagaagcggaagaggataactgccagggcagttgctccagttgattttgctgct
gaatctaggtttttgcttgaagacatatcgaagctgaaggcgtcataa
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