Pyrus communis (pear): 137711666
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Entry
137711666 CDS
T10779
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcox Pyrus communis (pear)
Pathway
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137711666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137711666
03009 Ribosome biogenesis [BR:
pcox03009
]
137711666
04131 Membrane trafficking [BR:
pcox04131
]
137711666
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcox04147
]
137711666
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
137711666
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
137711666
Membrane trafficking [BR:
pcox04131
]
SNARE
SNARE associated proteins
Others
137711666
Autophagy
Aggrephagy
Other aggrephagy associated proteins
137711666
Exosome [BR:
pcox04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137711666
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_14
AAA_22
TIP49
AAA_33
NPHP3_N
RNA_helicase
AAA_28
Parvo_NS1
AAA_17
nSTAND3
Mg_chelatase
AAA_lid_PRS2_C
AAA_18
AAA_7
ATPase_2
Vps4_C
ABC_tran
nSTAND_NTPase5
Viral_helicase1
NB-ARC
IstB_IS21
TsaE
DUF815
AAA_24
Sigma54_activat
NACHT
SLFN-g3_helicase
PRS2_N
PET117
Motif
Other DBs
NCBI-GeneID:
137711666
NCBI-ProteinID:
XP_068307023
LinkDB
All DBs
Position
12:complement(21830497..21834467)
Genome browser
AA seq
817 aa
AA seq
DB search
MAPPSPSAPDQSQPSSSLDPKSNKKDFSTAISERKKSPNRLVVDEAVNDDNSVISLHPSA
MEKLQFFRGDTVLIKGKKRRDTICIVMADNECEEPKIRMNKVVRANLRVRLGDIVSVRLC
HDVKYGKKVHILPIDDTIEGVTGSLFDAYLKPYFAEAYRPVRKGDLFLVQGMMRSIEFKI
IETDPDEYCIVAPDTEIFCEGEPVKREDEERLEDVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGTGKTLIARAVANETGAFFFSINGPEIMSKMAGESESNL
RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVGRRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKRMKLADDVDLERVAKDTHGF
VGADLAALSTEAALQCIREKMDVIDLEDDTIDAEVLNSMAVTNENFQTALSSTNPSALRE
TVVDVPNVSWDAIGGLENVKRELQETIKLPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSVGDAGGAGDRVLNQLLTEMDGMNAKKTVFVIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPISKDIDLAALARYTRGFSGADITEICQRACKYAIREDIEKD
IERQRRKNENSEAMEEDETDEGPEIKPVHFEESMKHARRSVSDADIKKYQVFAQTLQQSR
GFGSEFRFPQTENNGGEAAPTPFSSATVAGEEDDLYD
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacctagtccatctgctcctgatcaatctcagccgtcttcgtccttggacccg
aaaagtaacaagaaagatttttcgaccgccatttcggaacgaaagaagtctcctaatcgc
cttgttgttgatgaagctgtcaatgatgataattctgtgatttccttgcacccttctgca
atggaaaagcttcagtttttccgtggagacactgttttaattaaggggaagaaaaggaga
gacacaatttgcattgttatggctgataacgaatgcgaggagccgaaaatcagaatgaac
aaagttgtgagagctaatcttagggttcgcctcggggatattgtgtctgttcgtctctgc
catgatgtcaagtatggaaagaaggttcacatccttccaatcgatgatacaattgaaggc
gtgacaggaagcttattcgatgcatatttgaagccatactttgcggaagcttaccgccct
gtgaggaagggtgatcttttcctggttcagggcatgatgcgaagcattgagttcaagatc
attgagacagaccctgatgagtactgcattgttgcaccggatactgagattttctgtgag
ggagagcctgtcaaacgcgaggacgaggaaagactagaggatgtaggatatgatgatgtt
ggaggtgttagaaagcaaatggctcagatacgcgagttagtagaactgcctcttagacat
ccacagctcttcaaatcgattggagtgaaacccccgaaggggattttactctatgggcca
cccgggacggggaaaacattgattgcaagggctgtagcaaatgagactggagcgttcttc
ttttcgatcaatggacctgaaataatgtccaagatggcaggtgaaagtgaaagcaacttg
aggaaggcgtttgaggaagctgaaaagaatgcaccctcaatcatttttattgatgagata
gattctattgctccgaagagggaaaagacccacggtgaagtgggaaggcgtatagtttcc
cagctcctgactttaatggacggccttaagtcccgtgcacatgtcattgtaatgggagca
acgaataggccaaacagcatcgaccctgctctaaggagatttggaagattcgatagagag
attgacattggtgtcccggatgaagttggaagattggaagttttgcgaatccatacaaag
aggatgaaacttgcagatgatgttgatctcgaacgagttgcaaaagatacccatggtttt
gttggtgcagatcttgccgctctctccacagaggctgcgctccagtgcatccgtgaaaaa
atggatgttattgacttggaagacgatacgattgatgctgaggtgttgaattcgatggct
gtgacgaatgaaaacttccagaccgcactgtcctctacaaatccttctgccttgcgtgaa
actgttgtggacgtacctaatgtttcgtgggatgccattggcgggttggagaacgtcaaa
agagaacttcaagagactattaaactccccgtggagcatccagagatgtttgagaaattt
gggatgtcaccttcaaaaggcgttctcttttatggaccacctggctgtgggaaaaccctt
ctcgccaaggcaattgccaatgaatgtcaggccaacttcatcagtatcaaaggacctgag
ctgctaacaatgtggttcggagaaagtgaggcaaatgtgcgcgagatatttgacaaggct
cgccaatccgctccttgtgttcttttctttgatgagctggactcaattgcaactcagcgt
ggcaattctgtgggggatgctggtggtgccggagacagagtcttgaaccaacttctaacc
gaaatggatggaatgaatgcaaagaaaaccgtctttgtcattggggcgacaaacaggcca
gacattattgacccggcattgctcaggcctggacgtcttgaccaacttatctacatcccg
ctcccagatgaggcttcgcgccttcagatttttaaagcatgtctgcgcaagtcacccatc
tctaaggatattgacctagcagctcttgcccgttatacgcgcggttttagtggtgcagat
atcaccgagatatgtcaacgtgcctgcaaatatgccatcagagaagacattgagaaggat
attgagaggcaaagaagaaagaacgagaactccgaagccatggaggaagatgaaactgat
gagggacccgagatcaagccagtgcactttgaggaatcgatgaaacatgcccgaagaagt
gtgagtgatgcagacatcaagaagtaccaggtgtttgctcagactttgcaacaatctcgt
gggtttggatctgaatttcgatttccacagacagagaacaatggaggagaagcagctcca
accccattttcttcagccacagttgctggagaggaagatgatctctacgattga
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