Pyrus communis (pear): 137712016
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Entry
137712016 CDS
T10779
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHA4A
KO
K19039
E3 ubiquitin-protein ligase ATL7/58/59 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137712016
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137712016
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
137712016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_16
zinc_ribbon_16
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
137712016
NCBI-ProteinID:
XP_068307268
LinkDB
All DBs
Position
13:complement(17501404..17503755)
Genome browser
AA seq
266 aa
AA seq
DB search
MGSLPQTPNSTSNPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASALLSS
SQPVFPRSNYNLQAAPTRYHVSTACPVGLKEELKEKLQTILFDEEQRKKDSQCCVCLSEF
EVEEELLQVLSCKHVFHVDCIHHWLHNNTTCPLCRCSVIPISTKLDSPAPPAAASVSDPV
IQEQHHSIIISHQSPGSIVLLDQQNQQQQYQSGNNAISSVTIPIEEGPSSSDQSSTNLRY
SGRLPGLYSNEDLGEPVIVYIQTHDS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgggtagtcttcctcaaacaccgaacagtactagtaatcctcacctttatcctcaagca
ctccaacttaaactttaccaggccttcatattctcgattcctatccttttctccatcatt
cttttccttctcttctacttgttctaccttaaaagaagggcttccgctctcttatcttca
tctcaaccagtttttccaaggagtaattataatctgcaagctgcacctaccagataccat
gtttccactgcttgtccggtgggtttgaaggaggagctcaaggagaagcttcaaacaatt
ttatttgatgaagaacaaaggaaaaaggattcacaatgctgcgtttgcttgagtgaattc
gaagtggaagaggaattactgcaagtgctatcatgcaaacacgtgtttcatgttgattgt
atacatcactggctgcataacaacacaacttgcccactttgcagatgctctgtgattccc
atcagtaccaaactcgacagtcccgcaccacctgcagctgctagtgtgtccgatccagta
atacaagagcagcaccatagcataataatctcccatcagagtccagggagtattgtatta
ttggaccaacaaaatcagcaacaacagtatcaatcgggcaataatgctatttctagtgta
acaataccaattgaagaaggtccatcatcaagtgatcaaagtagtacaaacttaaggtac
tctgggaggttacccgggctctatagtaacgaagatttgggagaaccagtcattgtctat
atccaaactcatgattcatga
DBGET
integrated database retrieval system
