Pyrus communis (pear): 137712519
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Entry
137712519 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 30-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137712519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137712519
03009 Ribosome biogenesis [BR:
pcox03009
]
137712519
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137712519
Spliceosome [BR:
pcox03041
]
Complex A
U1 snRNP components
U1 related factors
137712519
Complex B
137712519
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Helicases
137712519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
137712519
NCBI-ProteinID:
XP_068307694
LinkDB
All DBs
Position
13:21346253..21350328
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AA seq
634 aa
AA seq
DB search
MYAYDNRHADVNSYRERRSDLMGPAPAAGGSAYGRGGGAAPYGGPSPPVAPYSARVGGPA
QGPGDFNGYPPFQPPSERFNIGRGGGNGSFGGRASNGHVGGGRGRGGRFGGGGRGFDGGR
GGGRSFGGSRGGGAGFGGGRGVGGRGGRHGGSSRGDLDNIMLPKQDFGTLVPFEKNFYAE
SPSVRAMSEHDVMVYRTRREITVEGHDIPKPIQMFEDANFPDYCLEAIAKLGFVEPTPIQ
AQGWPMALKGRDLIGIAETGSGKTLSYLLPALVHISAQHRLVQGEGPIALVLAPTRELAV
QIQEEALKFGLRSNIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQHTNLRR
VTYLVLDEADRMLDMGFEPQIRKIVSQTRPDRQTLYWSATWPREVESLARQFLRNPYKVI
IGSASLKANQSINQVVEVVTEVEKYNRLIKLLKEAMVGSRMLIFVETKKGCDHVTKQLRM
DGWPALSIHGDKNQAERDWVLAEFKSGRNPIMTATDVAARGLDVKDIKCVINYDFPSSLE
DYVHRIGRTGRAGATGTALTFFTHANAKFARDLIKILQEAGQVVSPALAAMARSSGSFGG
SGGNFRNRGRGGGFGNRGMISGSNTVPIGYKRPW
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctacgacaaccgacacgccgacgtcaactcctaccgtgagcgccgaagtgac
ctaatgggtccagcgcctgcggctggtggctccgcttatggccgtggcggtggggcagct
ccgtatgggggcccatcgcctccggttgctccgtattcggcaagggtgggtggaccggca
cagggtccaggagactttaatgggtacccgccgttccagcccccttccgagcggttcaat
atcggccgaggtggtggtaatgggagctttggtggaagagcgtcgaatggacatgttggt
ggtggaaggggtcgtggtgggagatttggtggcggtggcaggggttttgatggaggccgt
ggtggcggtaggagcttcggtggtagtcgtggtggaggtgcgggtttcggcggtgggcgt
ggagttggtggaagaggaggtaggcatggtggctcgtcaagaggagacttggataatatt
atgcttcccaagcaagattttgggaccttggtaccttttgaaaagaatttctatgctgaa
agtccttcagtgagggcaatgtcagagcatgatgttatggtgtatcgtactaggcgggag
attactgttgaagggcatgacatcccaaagccgattcaaatgtttgaggatgcgaatttt
cctgattactgcctcgaggcaattgcgaaattgggttttgttgaaccaacaccaattcag
gcacaaggatggccaatggcattaaagggtagagatttaattggcatcgctgagactggt
tctggtaagaccttgtcttatctgctgcctgctttggtacacattagtgcgcagcatcgg
ttagtgcagggagaaggtcctattgcgttagtattagcacctactcgagaattggcagtt
caaattcaagaagaagctttaaaatttggcttacgttccaatattaggagtacttgcatt
tatggaggtgctccaaaagggccccaaatacgcgaccttaaaagaggggttgagattgtc
atagctacacctggccgactgatagatatgttggaagctcagcatacaaatttgcgaaga
gtcacttatctagttttagatgaggctgataggatgttggacatgggatttgagccacag
ataaggaaaattgtttcccaaacccgaccagatcggcagacattgtattggagcgccacg
tggccaagggaggttgaaagtttagcaaggcagtttttacgtaacccatataaggtaatc
attggatcagcaagccttaaagcaaaccagtccataaaccaagttgttgaagttgtgacg
gaggtggagaaatacaataggctgatcaaattgctcaaagaagcgatggttgggagccga
atgctgatatttgtggagacgaaaaagggatgtgaccacgttactaaacaattgaggatg
gatggatggccagctctatccatccatggtgataaaaaccaggccgaaagggactgggtc
ttggctgagtttaaaagtggcaggaacccaataatgactgccactgatgtggctgcgcgg
ggtcttgatgtgaaggacataaaatgtgtgatcaattatgattttccatcaagccttgag
gattatgtccacaggattggaagaactggacgtgcaggagcaacaggaactgctttaacc
tttttcacgcatgcaaacgcaaaattcgctagggatctaatcaagatccttcaagaagca
ggtcaggttgtgagccccgcattggctgcaatggcccgatcaagtggtagtttcggagga
tccggagggaacttccgcaatagaggacggggaggaggatttgggaaccggggcatgatt
tctggttcaaataccgttcctatcggttacaagagaccttggtag
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