Pyrus communis (pear): 137712564
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Entry
137712564 CDS
T10779
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137712564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137712564
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137712564
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137712564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
LCE6A
Motif
Other DBs
NCBI-GeneID:
137712564
NCBI-ProteinID:
XP_068307753
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All DBs
Position
13:25835848..25843463
Genome browser
AA seq
905 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPREKAKSETRDWINNLVGELESQIDSFEAEIEGLTFKKGKGRPPRLTHLETSITRHKA
HIMKLELILRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSEVDELYNTLPLDKVES
LEDLAIIPPGLIKGAPMLCLKTSLAPLASPMPVCPQNLESMPAVTSTNQLSVSVQEPVED
TVSQDSNADNIPRTPPPKSGALSSSPASTPTGSHATPVSASVSTHNLPSVPSVLAIPGSN
AVRGVTENAGAANSSSPVSLSASVKEEELASFPGRRPSPSLSDAGLVRGISRGGFSAPIP
SSIPVSSSNVAPSNSALGAVPSVSDVTKRNILGADERIGSSGVVQPLVSPITNRLILPQA
AKASDGSAPVDSSNASEAGIPGRAFSPSMVSGMQWRPGSSFQNQNEAGMFRGRTEIAPDQ
REKFLQRLQQVQQQGHSTMLGMPPLAGGNHKQFSAQQNPLLQQFNSQNSSVSSQAGPGLG
VQPPVLGTVAPTTLQQQLNSIHQQSNQQPLMSSGQKEDASHPKVEDQQQQNIPDDSTADS
TPNSGLVKNLMNEDDLSASYTIDSLAGVSGTSTEPAQVPRDIDLSPGQPLQSNQPSASLG
VIGRRSVSDLGAIGDNLSGSTANSGGMHDQLYNLQMLDAAYYKLPQPKDSERARSYSPRH
PAITPLSYPQAQAPIVNNPAFWERLGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSW
RYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLE
DELIV
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaagtcggaagctccagggcgagatcgaccgcgttctcaagaaggtccaggaa
ggcgtcgatgtcttcgatagcatttggaacaaggtttacgatacggacaatgcgaaccag
aaggagaagtttgaggcggacctgaagaaggagattaagaagctacagaggtacagggac
caaatcaagacttggattcagtccagtgaaatcaaggataaaaaggtgagtgcctcttat
gagcaggctctggtggatgctcgcaaactcattgagcgcgaaatggaaaggtttaagatt
tgtgaaaaggagactaaaacaaaagcattttctaaagaaggattgggccaacaacctaaa
accgatccgagggagaaggccaaatcagagacaagggattggataaacaacttggttggg
gagttggaatcgcagattgacagctttgaagctgagattgaagggctaactttcaagaaa
gggaagggcaggccacccagactgacccatctagagacttcaattactcggcataaggca
catataatgaagttagaacttatcttgaggctattggataatgacgagctaagtcctgag
caggtcaatgatgttaaagactttttggaagactatgtggaacgcaatcaggaggatttt
gatgaatttagtgaagttgatgagctttacaacaccttaccattggacaaggtggagtcc
cttgaagatctggccattattcctcctggtcttatcaagggtgcaccgatgctttgcttg
aagacttctttggcaccactcgcatctccaatgcctgtatgtcctcaaaatcttgagtca
atgcccgctgttacttctactaatcagctgagtgtttctgtacaagagccagttgaagat
acagtttcccaggacagtaatgctgataacattcctagaactccacctcctaaaagtggt
gcgctttcttcgtctcctgcatcaacgccaactgggagtcatgcaactcctgtctctgca
agtgtttcaactcataatctgcccagtgtgccaagtgttttggccattccaggttcgaat
gctgttcggggtgtcacagagaatgcaggggctgctaattcttcatctcctgtaagcttg
tctgcttctgtgaaggaagaagaattagcaagcttccctggccgtagaccatcaccatct
ctttctgatgctggacttgtaaggggcatcagtcgaggtggcttctctgcaccaattcca
tctagtatccctgttagctctagcaatgtggctcctagtaatagtgcccttggtgcagtt
ccttcagtttctgatgtgaccaagagaaatatattgggagctgatgagagaattgggagt
agtggtgtggtgcagcctcttgtttcccccataactaacagactgatcttgcctcaagct
gccaaggctagtgatggaagtgctccagttgattctagtaatgctagtgaggctggtata
cctggcagagcattttctccgtctatggtctctggcatgcagtggaggcctggaagttcc
ttccaaaaccaaaatgaagcaggaatgtttcgtggaagaactgaaatagcacctgatcag
agggagaagtttttgcagcggctccaacaagtgcagcaacaaggtcatagtaccatgctt
ggcatgcctcctcttgctggtggaaatcataagcaattttctgcacagcaaaacccactg
ttgcaacagtttaattctcaaaactcatcagtgtcttctcaagctggccctggactagga
gtacagcccccagttctgggtactgttgcacctaccaccttacaacagcagctaaattct
atccatcaacagtctaatcaacagccattgatgtcaagtggacaaaaagaagatgcaagt
catccaaaagttgaggaccagcaacaacagaatatacctgatgattctactgcagactct
acccctaattctggactcgtaaagaatctaatgaatgaagatgacttgagcgcctcatat
acaattgattctctggccggagtttctggcacttccacagagcctgctcaagtaccacga
gatattgatctctctcctgggcaacctttacaatccaatcaaccttctgctagccttggt
gttattggcagaagaagtgtttctgatctcggtgcaattggtgataacctttctggatca
actgctaattctgggggaatgcatgatcagttgtataacttgcagatgcttgatgctgct
tactacaaacttccacaacccaaagactcagaacgtgcaaggagctatagtccaaggcac
cccgcaataacacctcttagctatcctcaagcacaagcacctattgttaacaatcctgcc
ttctgggagcggttaggtcttgaaccatatggcactgatacgctgttctttgcattttac
tatcagcagaacacttatcagcaatatttggctgcaaaagaattgaagaagcaatcttgg
agataccacaggaaatataacacttggtttcaacgacacgaggagccaaaagttgccacg
gatgaatatgaacaagggacgtatgtgtacttcgactttcatattgcaaatgatgatcta
caacatggatggtgccaaaggattaaaacagagttcacttttgaatataactatcttgaa
gatgaacttattgtatag
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