Pyrus communis (pear): 137712681
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Entry
137712681 CDS
T10779
Name
(RefSeq) prolycopene isomerase, chloroplastic-like isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00906
Carotenoid biosynthesis
pcox01100
Metabolic pathways
pcox01110
Biosynthesis of secondary metabolites
Module
pcox_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
137712681
Enzymes [BR:
pcox01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
137712681
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
GDI
Thi4
HI0933_like
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
137712681
NCBI-ProteinID:
XP_068307911
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Position
13:3360781..3366266
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AA seq
693 aa
AA seq
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MRFSHSLSIPELGFSPSMEIYQFPSRHCITQLSSSKPRVQNHSFQQHGSQGNGVSLCGFQ
LGSQSSQAFGHGCNLQLGSRVGPRSRKLKVLSFGHGRSSLTNDCKLSGLDLGFCKSKLFQ
GSHLWGSDFSRHMHGRVELELEEANSRNFSFVVRSSSTLGVEKEVEREEGGAKKNYDAIV
IGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNL
NLITQALAAVGCEMPVIPDPTTVHYHLPDNLSVVVHREYSEFVSELTNKFPHEKQGILKF
YGVCWQIFNALNSLELKSLEEPIYLFGQFFQKPVECLTLAYYLPQNAGDIARKYIQDPQL
LSFIDAECFIVSTVKALQTPMINASMVMCDRHYGGINYPVGGVGGIAKSLAKGLVDQGSE
ILYKANVTNIIVDQGRAVGVRLSDGREFFAKTIISNATRWNTFGKLIKADQVPKQEEDFQ
KVYVKAPSFLSIHMGVKAEVLPPETDCHHFVLEDDWTRLEEPYGSIFLSIPTVLDSSLAP
EGRHILHIFTTSSIEDWEGLSRKDYEAKKELVADEIIHRLENKLFPGLKSSIAFKEVGTP
KTHRRYLARDKGTYGPIPRNTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVSFSGVM
CAHRVAADIGLEKKSPVLDAALLRLLGWLRTLA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttcccattcactttccatacctgagcttggattctctccttccatggagatt
tatcagtttcccagtcgccactgcatcacccagttgagttcttcaaaacccagagttcaa
aatcacagttttcagcagcatggctctcagggaaatggcgtcagcctctgcggattccaa
ttggggtctcagagctctcaagcttttggccatggatgtaatttgcagttgggtagtaga
gtcggacccagaagccgaaaactcaaagttctctcctttgggcatggtagaagctcactt
actaatgattgcaagctcagtggattggatttagggttttgcaaaagcaaattgtttcaa
gggagtcatttgtggggttcagattttagtaggcacatgcatgggagagtggaattggag
ttggaggaggcgaattcgaggaattttagtttcgttgtgaggtctagttcgacattgggt
gtggagaaagaggtggaaagggaggaaggtggcgctaagaaaaattatgatgccattgtt
atagggtcaggaattggagggttggttgcagcaacacaattggctgtgaagggtgcaaag
gttttggttttggagaagtatgtgatccctggtgggagctctgggtattatgagagggat
ggttatacttttgatgttggatcttctgtgatgttcgggttcagcgataagggcaatcta
aatttgataacccaagcactggcagctgtaggttgtgagatgccggtgatacctgatccg
actaccgtccattaccatctacctgataatctttctgtcgtagtgcacagagaatacagt
gaatttgtttcagaacttactaataaatttccccatgaaaagcaagggattctcaaattc
tatggtgtatgttggcagattttcaatgccttgaactcattggaactgaagtcacttgag
gagccaatctacctttttggacagttctttcaaaagcctgttgaatgcttgacacttgcc
tactatttgcctcaaaatgctggggatatagctcgcaaatacattcaggacccccagctg
ttgtctttcatagatgcggagtgttttattgtgagtacagtcaaggctttgcaaacacca
atgatcaatgcaagcatggttatgtgtgataggcattatggtgggattaactaccctgtt
ggtggtgttggtggaattgcaaagtccttagcaaaaggtctggtagaccagggcagtgag
atactttacaaggccaatgttactaacatcatagttgatcagggcagagcggttggagta
aggctttcagacgggagggaattctttgcaaaaaccataatatcaaatgctacaagatgg
aatacctttggaaaactgataaaagcagaccaggtcccgaaacaagaggaagattttcag
aaagtttatgttaaggccccatcttttctttccattcacatgggggtgaaagctgaggtt
ttgccaccagaaacagattgccaccattttgtgcttgaggatgattggacgaggttagaa
gagccttatggaagtatatttttaagcattccaactgttcttgattcatcgttggcccca
gaaggacgccatattcttcacatatttacaacctcttcaatagaggactgggagggactg
tctcgaaaggactatgaggcaaagaaggagcttgtagcagatgaaatcatacacagatta
gagaataaactatttccagggctcaaatcgtccattgcttttaaggaggtgggaacacca
aagacacacaggcgatacctggctcgtgacaagggtacttacggaccaataccgcgtaat
actcctaagggattattgggaatgccgttcaatacaaccgccatagatggtctttactgt
gttggtgatagctgctttccgggacaaggagttatagccgtatccttctcaggagtaatg
tgtgctcatcgagtagctgctgatattgggcttgagaagaagtccccagtattggatgct
gcgctccttcgactacttggatggttaaggacattagcgtga
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