Pyrus communis (pear): 137712710
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Entry
137712710 CDS
T10779
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137712710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137712710
03041 Spliceosome [BR:
pcox03041
]
137712710
03036 Chromosome and associated proteins [BR:
pcox03036
]
137712710
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137712710
Spliceosome [BR:
pcox03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137712710
Complex B
137712710
Complex C
U2 SnRNP specific factors
137712710
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
137712710
TFTC complex
137712710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
137712710
NCBI-ProteinID:
XP_068307947
LinkDB
All DBs
Position
13:3674654..3685122
Genome browser
AA seq
1360 aa
AA seq
DB search
MAVSEEECSSAKSRSSSSASSSTSSYYLAKCVLRGSVVLQVLYGHIRFPNSYDVVFGKET
SIELVIIGEDGIVQSICEQPVFGTIKDISILPWNDKFCTQNPQMVGKDLLVVISDSGKLS
FLSFCNEMHRFFPVTQVQLSNPGNSRNQLGRMLAIDSSGCFIAASAYENRLAMFSVSLSG
GSDIIDKKILFPPENELDGSAARVQKNSIHGTIWSMSFISKDPRQSSKGHSPVLAIILNR
RDAVLNELLLLGWNIRDQDIYVISTYVEDGPLAHSIVEVPHSPGFAFMFREGDALLMDLR
DAHHPFCVCRTSPNFLSNVVDEANFVQESSRGCDLSRVLQVDDEGGLFNVAACALLELSD
LDPMCIDGDKYNVNVTYKHVCSWSWELGNVKNPRMIVCADTGEYFMIEIIFGPDGPKVQE
SECLYQGSPSKALLWAEGGFLAALVDMGDGMVLKMENGMLLYTSPIQNIAPVLDMSVVDY
HDEKHDQMFACCGVAPEGSLRIIRSGISVEKLLRTAPIYQGITGTWTLRMKVIDSYHSFL
VLSFVEETRVLSVGLSFTDVTDSVGFQPDVSTLACGIVNDGLLVQIHKNAVRVCLPTKAA
HSEGIPLPSPVFTSWFPENMSISLGAVGHNLIVVSSSNPCFLFILGVRVLSSHQYEIYEM
QHLSLQNELSCVSIPHKCFGQTTNTLPFGVDVSNTFVIGTHKPSVEVLSYLPNEGVTILA
SGMISLTNTLGTAISGCIPQDVRLVLVDRLYVLAGLRNGMLLRFEWPAASAMPLSVLTSR
SLVGRQIYDKLYEKTKDYYPVELQLIATRRIGITPVFLVPLSDSLDGDIVVLSDRPWLLH
TARHSISYTSISFQSSTHVTPVCYVECPKGVLFVAENCLHLVEMVHSKRLNVQKFHLGGT
PREVLYHSESRLLLVMRTDLIDDTCSSDVCCIDPLSGSVLSSFKLEPGETGKSMELVRVG
NEQVLVVGTSLSSGPAIMPSGEAESTKGRLIVLCLEHVQNSDSGSMTFCSKAGSSSQRAS
PFHEIVGYATEQLSSSSLCSSPDDTSCDGIKLEETEAWQFRPTYSSIWSGMVLAICSYLD
RYFLASAGNAFYVCGFPNDNPQRVRKFNVARTRFMITSLTTHFTTIAVGDCRDGVLFYAY
HEDSKKLQQLYFDPCQRLVADCILMDVNTAVVSDRKGSIAVLSSADYSEDSASPECNLTV
SCAYYMGEIAMSIRKGSFSYKLPADDLLKGSDGNIDFSRNAIIVSTLLGSIITFVPISRE
EYELLEAVQDRLVVHPLTAPILGNDHNEYRGRENPAGVPKILDGDMLSQFLELTNMQQEV
VLASPFGAQGTPKPSLKSRNVPIPVNQVVQLLERVHYALN
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggccgtttcagaggaagagtgttcctccgccaagtcccgatcgtcgtcgtcggcttcc
tcctccaccagctcttactacctcgccaagtgcgtcctccgcggaagcgtcgttcttcag
gtcctctacggtcacatccgcttccccaactcttacgacgttgtcttcggcaaggagact
tcaatagagttggtaataattggggaagatgggattgtacaatctatatgtgagcagcct
gtgtttggtaccattaaagacatttccattctaccctggaatgacaaattctgcacacaa
aacccgcagatggtgggtaaagaccttttggttgttatttctgattctgggaagctctcg
tttctctcgttttgcaatgaaatgcacaggttttttcctgtgacacaagttcaactttct
aatcctggaaattcaaggaatcagcttggaagaatgctagcaatcgattcaagtggctgt
ttcattgctgctagtgcttatgaaaaccgtttggctatgttctctgtttcgttgtctgga
ggcagtgacattattgataagaaaatactatttcccccagaaaatgaactagatgggagt
gctgccagagtccagaaaaacagtattcacggtactatatggagcatgagctttatttca
aaggatcctaggcaatcaagtaaggggcatagtcctgtacttgccattattctaaatagg
agagatgcagtccttaatgaattgctgttactgggatggaatattagggatcaggatata
tatgttatttctacatacgtagaagatggaccattagcacatagtattgttgaagttcct
cattcccctggatttgcttttatgtttagggagggtgatgctctcctaatggatcttaga
gatgcacaccaccccttctgtgtctgtagaacaagcccaaatttcttatccaatgtggtt
gatgaggcaaattttgttcaagagtcatctagaggatgtgatctgtctagagtacttcag
gttgatgatgaaggaggtttattcaatgtagctgcttgtgctttactagaactgagcgat
ttagatccaatgtgcatagacggtgataaatacaatgtgaatgtgacttacaaacatgtg
tgttcatggtcttgggaactggggaatgtaaaaaatcctagaatgatcgtttgtgcagat
acaggagagtatttcatgatcgaaattatctttggtcctgatggccccaaggttcaagaa
tctgaatgtctttaccaaggttcaccatccaaggcacttctgtgggctgaaggcgggttt
cttgctgcactagtagacatgggggatggaatggtcttgaaaatggaaaatggaatgctt
ctttacacaagccctattcaaaatattgccccagtgttggatatgtcagttgtggattac
catgatgaaaaacatgatcaaatgtttgcctgttgtggagtggcacctgagggatcatta
aggattattagaagtggtatcagtgtggaaaagctattaaggactgcacctatttatcaa
ggaattactggtacttggacattacgaatgaaagtaattgattcttaccattcttttctt
gtgctatcatttgtagaggagaccagggtattatcagttggtttaagctttactgatgtg
acggattctgttggttttcagcctgatgttagtactttggcttgtggtattgtaaatgat
gggttgctggttcagattcacaaaaatgcagttagggtctgtttgcccaccaaggctgcc
cattctgaaggtattccacttccttctcctgttttcacatcttggttcccagaaaatatg
agtatcagtttgggggctgttggccataatctcattgttgtttcttcatctaatccatgt
tttttattcattcttggggtcagagtgctttcgtcacatcagtatgaaatttatgagatg
caacatttgagcttgcaaaatgaattatcatgtgtttctattcctcataaatgttttggg
caaaccactaatactctcccatttggagtcgacgtaagcaatacctttgttattggcaca
cacaagccctcagtggaagttttgtcttatttgcctaatgaaggcgtgacaattcttgct
tctgggatgatctcattaacaaatactttaggaacagctatcagtggttgcattcctcaa
gatgtaaggcttgtattagttgacagattgtatgtccttgcgggattgaggaatggaatg
ctacttcgtttcgaatggcctgctgcctctgcaatgcctctgtctgttttaaccagtcgc
agtcttgttggccgacaaatatatgataagttatatgagaagacaaaggactattatcct
gttgagctgcaattgattgccactcgtcgcattggcatcactcctgttttcttggttcct
ttgagtgactcgctagatggtgatatagttgttctcagtgataggccttggttgttacat
actgcaaggcacagtatctcgtacacttctatctcatttcaatcatcaacacatgtcact
cctgtatgttatgtcgaatgccctaagggagttttatttgttgcagagaactgtctacat
ttggtagagatggtgcacagcaagaggcttaatgtgcagaagtttcatcttggaggcact
ccgagagaggtcctttatcatagtgaaagcaggctattgcttgtgatgaggactgatttg
attgatgatacatgctcatcagatgtatgttgcattgatcctctaagtgggtctgtgctg
tcatccttcaaacttgaacccggtgaaacaggaaaatcaatggagttagtgagggttgga
aacgaacaagttcttgtggttgggacgagcttatcttctggtccagccataatgcccagt
ggtgaggctgagagtaccaagggccgtcttattgttctttgtcttgaacacgtgcaaaat
tcagacagtggctcaatgacattctgctcaaaggcagggtcatcttctcaacgagcatct
ccgtttcatgaaattgttggatatgccacagaacagctttctagcagtagtctctgcagt
agtccagatgacactagctgtgatggaattaaacttgaagaaactgaagcatggcagttt
cgacccacttattcatccatatggtctggaatggtacttgcaatctgctcttatcttgat
cgttacttcttggcttctgctggcaatgctttttatgtatgtggtttccctaatgacaat
ccgcaaagagtgagaaagtttaatgtggcaaggacacgttttatgattacatcattgact
acacatttcactacaattgctgttggtgattgtcgtgatggtgtccttttctatgcttat
catgaggattccaaaaagctgcagcaactgtactttgatccatgtcagagattagttgct
gattgcattcttatggatgtcaatactgctgttgtttcagatcggaagggaagcattgct
gtcctttcatctgcagattactctgaagatagtgcaagtccagaatgtaatttaacagtg
agctgtgcttattatatgggggagatagctatgagcatcaggaaggggtcattttcatat
aaacttccagctgatgatctattgaagggcagtgatggaaatatcgacttctctcgaaat
gctatcattgtgagtacgctgcttggaagcataataaccttcgttccaatatccagggaa
gaatacgaactcttagaagctgtccaagatagactggtggtgcatccgttaactgctcct
attcttgggaatgatcacaatgagtatcgtggtcgtgaaaacccggcgggagtgcctaag
atacttgacggtgacatgctctctcaattcttggagctcacaaatatgcaacaagaggtt
gtactagcatcaccttttggtgcacaaggcacaccaaagccctctctgaaatcacgaaat
gtaccaatacctgttaatcaggttgttcaactcctcgagcgggttcattatgccttaaac
taa
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integrated database retrieval system
