Pyrus communis (pear): 137712831
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Entry
137712831 CDS
T10779
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pcox Pyrus communis (pear)
Pathway
pcox03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137712831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137712831
03036 Chromosome and associated proteins [BR:
pcox03036
]
137712831
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137712831
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137712831
PBAF complex
137712831
GBAF(ncBAF) complex
137712831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
137712831
NCBI-ProteinID:
XP_068308102
LinkDB
All DBs
Position
13:complement(20305665..20308855)
Genome browser
AA seq
541 aa
AA seq
DB search
MNNNNQPRNVGVPPHFGNSGAVSQPVAMNHQPHLLTQSQPPTQGGAHFSGHFQLSEPQAQ
ALAQAQYVNAHAQAQTQAAHAQFVQLQAQAQSLAQLHNANTSNVGGSSPSVATPSTGTAK
RANQKPPSRPPGSSSANTGSPFKTMELTPAARRKKQKLPDKQIPDKVAALLPESGLYTQL
LEFESRVDAALARKKMDIQESLKCPPRVQRTLRVYVFNTFANQTQTNPEKTNAEPPSWSL
KIIGRLLEDGRDPVVAGLTPKSRAKFSSLFKKVTIYLDQTLYPDNHVILWESSRSPALHD
GFEVKRKGDKEFTAIVRLEMNYVPEKFKLSPALHEVLGIEVETRPRIIAAIWHYVKARKL
QNPNDPTFFVCDPPLQKIFGEEKMKFSMVSQKISQHLTPPQPIHIEHNIKLSGNCPAGTT
CYDILVDVPMVLEKEMSAFLGSTERSKEIDACDELICASIKKIHEHRRRRAFFLGFSQSP
AEFINTLIASQSKDLKLVAGDASRNVEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPGS
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatcagcccaggaatgtgggggtgccaccccactttggcaattctggg
gcggtgtcgcaacctgtggccatgaatcaccagcctcatcttctcactcaatcgcagcct
ccgacacaagggggagctcatttttcagggcactttcagttgtctgagccgcaagcgcag
gcacttgcacaggcacagtatgtgaatgctcacgcacaagcccaaacccaagctgcccat
gcccaatttgttcagttgcaagctcaagctcagtctcttgcccagttgcataatgcgaat
acaagtaatgttggtggttcatcaccctccgtggcaacacctagcacaggaactgctaag
cgggcgaaccagaagccaccttctcggcctcctggttcatctagtgccaacacgggttca
ccatttaaaaccatggagctcaccccagctgctcgtagaaagaagcaaaagctacctgat
aaacaaataccggacaaagtggctgcacttctaccagagtctggtctttatactcagttg
cttgaatttgagtctcgtgttgatgctgctttggcaaggaagaagatggacatccaagag
tcccttaaatgtcccccccgtgttcagagaacacttagagtttatgtattcaacaccttt
gcgaatcagacacaaacaaatcctgagaagacaaatgcggaacccccttcatggtcactt
aagataattgggaggttactggaagacgggagggatcctgtggtggctggattgacacca
aaatcaagggcaaaattttcatcactgttcaagaaagttaccatatacttggaccaaacc
ctctatccagataaccacgtgattttatgggaaagttcccgttcacccgctcttcatgat
ggctttgaggtgaaaagaaaaggggataaggagtttacagcaatagtaagactagagatg
aattatgtacctgagaaattcaaactttcaccagctctccatgaagttctgggaattgag
gtagagacccgacccagaattatagctgctatttggcactatgtcaaggccaggaagttg
cagaacccgaatgaccctactttctttgtgtgtgatccacctcttcagaagatttttggg
gaagagaagatgaagttttcgatggtttcacaaaagatatcgcagcatttaactccacca
cagcctatacatatagagcataacataaaactttcaggaaattgcccagctggaactacc
tgctatgatatactggttgatgtacccatggtattagagaaagagatgtctgctttctta
ggaagcaccgagaggagcaaagagattgacgcttgtgacgaattgatttgtgcatccata
aaaaaaatccatgaacatcgacggcggcgagctttctttcttgggttcagtcaatctcct
gcagagtttattaatactttgattgcttcccagagcaaggatctcaagcttgttgctgga
gatgctagtcgtaatgtggaaaaggagcgccgctccgatttctacaatcaaccttgggtt
gaggatgctgttattcgttacttgaaccgaaagtcagccggaagtgatgctcccggaagc
acttga
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