Entry |
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Name |
(RefSeq) endoribonuclease Dicer homolog 2-like
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KO |
K11592 | endoribonuclease Dicer [EC:3.1.26.-] |
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Organism |
pcox Pyrus communis (pear)
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Brite |
Chromosome and associated proteins [BR:pcox03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
137712906
microRNA pathway
RISC loading complex
137712906
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SSDB |
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Other DBs |
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LinkDB |
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Position |
13:7314921..7319494
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AA seq |
729 aa
MEKDGNKSADPLGVEEATQELGRDDEQPRYVPAELVKPPCSNDASVMYHCYLIKLKQNFD
CDIPVSDIVLGTRNKLDSDTIANMNFELKVQRGPLTVNFEYAGDVNLCSEQALACRRFQI
TIFRILVDQEVKKLEEVLERFHLGQNHETESIDYLLLPAARIHQRASIIDLDSVMSMSSH
SNEDSENCVCVDCPQPNNNSHVPLHTKNGMVCTCRIQNSVVYTPHTDSLYCITGLLDDLT
GNSLMRHNKSITYKAYYEAKHGINMRFDQQLLLNGRCIFRAQNYLLWSRQQRKRESSHAS
VELPPELCTIIMSPISISNLYSFSFVPSIMHRLESLLLAVNLKQMILDHLPQNVTIPTIK
VLESITTEGCQENLDLESLETLGDSFLKYAASQQFFKTCQNDREGLLSEYKEKIISNLSL
GKLGCDRKISGFIRNEAFDPKKWIIPGDYCRSYFLKKKLLFDKRSIYVGGTRKIDAKIVA
DVVEALIGAFLTTGGELHAIYFMNWVGIKVDLDHKQYERHLQVQSEIPVDVGHLESLLGN
YKFQDPSLLMEALSHGSYIAGGYQRLEFLGDAVLDYMITTHFYDKYPEMMAPGILTVLRS
ASVNNECYARSAVKAGLHKHILASDVVHSNIDRTVNNFGLLSTESTSGLKSETYFSDVLA
DIVEALAGAIYIDSGYNKKIVFQSIRPLLEPLVSPYEPSFWTRFQGELLKKSIIKCRNLS
SASKVVRLQ |
NT seq |
2190 nt +upstreamnt +downstreamnt
atggagaaagacggaaataaatctgctgatcctctcggtgtggaagaagccacacaagaa
cttgggcgtgacgatgaacaacctcgttatgttccagccgagctggtcaaaccaccgtgt
tcaaatgatgctagtgtaatgtatcattgctacttaattaagctgaagcagaattttgat
tgcgatattccagttagtgatatcgtacttggcacaaggaataaacttgatagtgatacc
attgcaaatatgaattttgaattaaaagttcaaaggggtcctttaacagtaaactttgaa
tatgctggagatgttaatctatgttcagagcaggctcttgcttgcagaaggttccaaatc
acaatttttcggattctggtggatcaggaagtgaaaaagttggaggaagttttagaaaga
tttcatttgggacaaaaccatgagactgaatcgattgattaccttttgctaccagcagca
aggatacaccagagagcttccatcattgatttagacagtgttatgtctatgtcgtcccat
agtaacgaagattctgagaattgtgtttgtgtagattgtcctcaaccaaacaacaattcc
catgttccactacataccaaaaatggtatggtttgtacgtgcaggatccagaattccgtg
gtctatacgcctcataccgatagcctgtattgcatcactggcctgttggatgacttgact
ggaaactcactaatgaggcacaacaaatctattacctacaaagcctactatgaagcaaag
catgggatcaatatgcgttttgatcaacagttattgctgaatgggagatgcatctttcgg
gcacaaaattatcttctgtggtccagacaacagagaaaaagagaatcaagtcatgcatcc
gttgaactgccgccagaactttgcactataatcatgtcacctatatcaatcagcaattta
tattcgttctcatttgttccgtccatcatgcatcggcttgagtcattactactcgctgtc
aacttgaaacagatgattttggatcatttgccgcaaaatgttactatcccaaccattaag
gtcttggaatctattaccacagaaggttgccaagagaacttagatttggaatccttggaa
actcttggagattcctttcttaagtatgctgcaagtcagcagtttttcaaaacctgtcaa
aatgatcgtgagggcctccttagcgaatataaggaaaaaataatttctaatctttccctg
ggcaagcttggatgtgaccgtaaaatttcgggttttattcgtaacgaggcttttgatcca
aaaaagtggattatacctggagattattgtagaagttatttcttaaaaaagaagttgctt
tttgataaaagaagcatctatgttgggggaacaaggaagatcgatgctaaaattgttgca
gacgtagttgaggcactaatcggtgcatttcttactacaggtggtgaactacacgccata
tatttcatgaactgggttggtataaaggtggatttagaccacaaacaatatgagaggcac
ttacaagtgcagtcagagattcccgttgatgttggacatttagagtcattgcttggcaac
tataaatttcaggatccttctcttctcatggaagcattaagccatggttcttatattgcc
ggaggttaccagcggctagaatttcttggtgatgcggtgttggattatatgatcactact
catttttacgataagtatcctgagatgatggccccaggaattttaactgttctgaggtct
gcttctgtgaacaatgagtgttatgcacgatctgctgtgaaggctggattacacaagcac
attcttgcttcggacgtagtccacagtaatattgaccgcactgttaacaatttcggattg
ctgtctacggaatcaacttctggattaaaatctgagacatacttcagcgatgtacttgct
gatatcgttgaggctctagcaggggcaatttatattgattccggatacaataaaaaaatc
gtctttcaaagcatccgtcctctcttagagcccttggtttctccatacgagccttcattc
tggacgagattccaaggtgaattgctcaaaaaaagcattataaagtgcagaaacctgtca
agtgcttccaaagtggttcggctacaatag |