Pyrus communis (pear): 137712964
Help
Entry
137712964 CDS
T10779
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Module
pcox_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137712964
Enzymes [BR:
pcox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
137712964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137712964
NCBI-ProteinID:
XP_068308281
LinkDB
All DBs
Position
1:complement(3983047..3984898)
Genome browser
AA seq
586 aa
AA seq
DB search
MSIINTLVRILVFFLASSLFIGIGQGQKILDVTKYGAVGDGRADDSQAFFKAWKDLCQGN
NDATDDIPILIVPEGKTYLLQRIKFEGPCNSKSVHVQVLGNLLAPMRGAWKECDSGDWLS
FSNIENLMLDGSGKIDGQGAAWWSTSQYDARSRKLLANNNCKPNKALQFHNCQNLKLRGL
TFLNSPQAHIGINSCDNADVSDLNIHAPEDSPNTDGIDISSSTHVTIRNSFIGTGDDCIA
IGDGCSFLYITNIACGPGHGISVGSLGEDGASNKVDNIYVKDCSFTGTTNGARIKTWQGG
SGYARNITFERIKLDRAKYPIIIDQYYCNGEHNCKSQSSAVVVADVTYSDFEGTSATDEA
IKLNCDKVSGGCHNILMDRINIVSAVGDMKIFSSCNNADGTYVGTTVPDVACLKSSTTEP
ATPTTPSSPKTTAPPVQILPLPSPPPIPVMPLPSPSPVPVMPLPSPSPVPVMPLPSPSPV
PIIPPPARPPVSVIPPPSLPSITPPPEDIMPPPVPITPPPQPITPPQSTAPPVPQGLDIT
GGAGEAGELDPSYFPSGAPGSANLPISYYLFCPLMVVLAATTIIFN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcatcaacacactcgttcgcattttagttttcttcctcgcttcgtcattgttt
attggcatcggacaaggccaaaaaatattagacgtaaccaaatacggtgctgtgggagat
ggacgggcagatgactcccaagctttttttaaagcgtggaaagatttatgtcaaggaaat
aatgacgctacggatgacataccgatacttattgtgccggaggggaaaacgtacttattg
caacgtataaagtttgaaggtccatgcaattcgaagagcgttcatgttcaggttctaggg
aatttgttggctcctatgcgtggtgcatggaaagaatgcgattcgggggattggctaagt
ttttcaaacattgaaaacctaatgctcgacggctcaggaaaaatcgacggccaaggggct
gcgtggtggagcaccagccagtatgatgcgagatcacgcaaactcttggcaaataacaac
tgcaaaccaaataaggcattgcagttccacaactgtcaaaaccttaaactcaggggactg
acttttctgaacagcccgcaagcgcatattggtataaatagttgtgacaatgcagatgtc
tcagatttgaacatacatgcgccggaagacagtccaaacactgatggtattgacatctct
tcgtcaacccatgtcaccattcgcaactcgtttatcggaacaggcgatgattgtatcgcc
attggcgacgggtgttcctttctctacatcaccaacattgcgtgcggaccaggccatgga
attagcgttggaagcttaggagaagatggagctagtaataaagtggacaacatatacgtg
aaagattgtagttttactggaactacaaacggagcgagaataaaaacgtggcagggcggc
tccgggtatgcgaggaacatcacgtttgaaaggatcaaacttgacagagccaaataccct
atcattattgaccagtattattgcaatggggaacacaattgcaaaagtcagtcgtcggcc
gtggtggtggcggatgtgacgtacagcgattttgaaggcacttctgcgacggatgaggcg
attaaactcaactgcgacaaagtgtcgggtggctgtcataatattttgatggatagaatt
aatatagtgtcagcggtcggggatatgaagattttttcgtcttgtaacaatgccgacgga
acttatgtcggcactacggtacccgacgtggcttgtctaaagagttcaacaacggagcct
gcgaccccaacaacaccatcttcaccaaaaactaccgctccgccggtacaaatcctacca
ttgccatcgccaccacctataccggtaatgccgctgccgtcgccgtcacctgtaccggta
atgccactgccgtcgccgtcacctgtaccggtaatgccactgccatcgccgtcacctgta
ccaatcattcctccgccagcgcgaccaccggtatcagtcataccaccgccatcgctgcca
tcaatcaccccaccaccagaagatatcatgccaccgccagtgccaatcacaccaccaccg
caaccaatcacgccaccacagtcaactgcaccacctgtgccacagggactagacatcaca
ggaggggcaggggaggctggcgagctagatccttcgtacttcccaagtggagctcctggc
agtgctaatctacctataagctactacctattttgtccactgatggtggtccttgctgca
acaactataatttttaattaa
DBGET
integrated database retrieval system
