KEGG   Pyrus communis (pear): 137713080
Entry
137713080         CDS       T10779                                 
Name
(RefSeq) target of rapamycin complex subunit LST8 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
pcox  Pyrus communis (pear)
Pathway
pcox04136  Autophagy - other
pcox04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    137713080
   04136 Autophagy - other
    137713080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcox04131]
    137713080
Membrane trafficking [BR:pcox04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    137713080
   mTORC2 complex
    137713080
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_IFT140_1st ASA1 CFAP251_N ANAPC4_WD40 Beta-prop_Nup120_160 NBCH_WD40 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_IP5PC_F PAC11 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT140_2nd Beta-prop_ACSF4 PROPPIN Beta-prop_DCAF12 Nucleoporin_N Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR35_2nd DmsR_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 137713080
NCBI-ProteinID: XP_068308432
LinkDB
Position
13:5452920..5456824
AA seq 325 aa
MSTQEEIKMIQQPSVILATASYDHTVRFWEAKSGRCYRTIQYPDSQVNKLEITPDKRFLA
AAGNPHIRLFDVNTNSHQPVMSYESHSNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPG
CQREYESRAAVNTVVLHPNQTELISGDQNGNIRVWDLKANSCSCELVPEVDTAVRSLTVM
WDGSLVVAANNHGTCYVWRLLRGNQTMSNFEPLHKLQAHKGYILKCLLSPEFCEPHRYLA
TTSSDHTVKIWNVDGFTLEKTLVGHQRWVWDCVFSADGAYLITASSDTTARLWSMSTGED
IRVYQGHHKATICCALHDGAEPSAS
NT seq 978 nt   +upstreamnt  +downstreamnt
atgtcaacacaggaggagattaagatgatccaacaaccatcggtgatccttgcaacggct
agctatgatcacactgttcggttttgggaggccaaaagtggccgctgctaccgtaccatc
cagtaccctgattcacaagttaataagctcgagataactccagataaacgcttcctggct
gcagccggaaatcctcacattcgattatttgatgttaatacaaatagccatcaaccggtg
atgagctatgagtcacatagtaataatgtaatggctgtagggtttcaatgcgatgggaac
tggatgtattcaggttctgaggatggtacagtaaaaatttgggatctgagagctccgggt
tgtcaaagggaatatgaaagtcgtgcagctgttaacactgttgtgcttcacccgaaccag
actgaactaatatctggggaccaaaatggcaatattcgtgtttgggatttgaaagcaaat
tcgtgcagctgtgaattggttccagaggtggatacggctgtaaggtcattaacagttatg
tgggatgggagcttggttgttgcagcaaataatcatgggacatgctacgtttggcgcttg
ttgcgtggaaaccagacgatgtcaaattttgagccacttcataagctgcaagcacacaag
ggatacattcttaaatgtcttctttcacctgaattctgtgaaccccacagatacttggca
accacctcttcggaccacactgtcaagatatggaatgtagatggtttcacattagagaaa
actttagtaggacatcaacggtgggtgtgggactgtgttttctcagcggacggtgcctat
cttataacagcttcctctgatacaacagcgagactttggtccatgtccaccggtgaagat
atcagggtgtatcaggggcatcacaaagcaacaatttgttgtgcactccatgatggagcc
gaaccttctgcatcctga

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