KEGG   Pyrus communis (pear): 137713200
Entry
137713200         CDS       T10779                                 
Name
(RefSeq) protein RRP6-like 2
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137713200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcox03019]
    137713200
Messenger RNA biogenesis [BR:pcox03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     137713200
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT
Other DBs
NCBI-GeneID: 137713200
NCBI-ProteinID: XP_068308573
LinkDB
Position
13:529965..536785
AA seq 914 aa
MSQDAVTMDQSPPPQTNSDALQTLTKGALSSSISKLSGSSRFLPNSKDFYFYRNFDEFRV
PIEQITKESQTMLGSIGSSAPVWRKPVAFPDDLDDAYDWLVNVNDEALERFDSSVDEFKI
VRKEVEEAKRPTSAAMDTDDGFQLVCGKKKKGPTGSAAASGNDDSSQVSSAVKVASKDKK
TVVATKPKVPFHIPSIRRPQEEFNILVNNANQPFEHVWLQRSEDGQQFLHPLEKLSVLDF
VDNNIGDVESVKPASLESTPFKLVEEVKDLKELAAKLRAVNEFAVDLEHNQYRSFQGLTC
LMQISTRTEDFIVDTLKLRIHVGPYLREVFKDPAKRKVIHGADRDIMWLQRDFGIYICNL
FDTGQASRVLKLERNSLEYLLQNLCGVTANKEYQNADWRLRPLPEEMIRYAREDTHYLLH
MYDLMRTQLCLMPKESENSDTPLVEVYKRSYDLCMHLYEKELLTENSYLHIYGLQGAGFN
SQQLAIVSGLCEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLKRLVKSKHPYME
RNLGSVVSIIRHSMQNAAFFEPAVEHLKVARAGMASEENILVNDGSEALLPDQSVSNSSN
GDLSVVSPPSQQHRMEYKGIAFGASELVRNGQGNSPETGSPISVNLRQNSVPGQSREARS
NACLLDSAKVTGVSVQVQKKPSRAFSSLLGSAVPKRKVDVDKKGKEDNKLEQIRSSVNFP
FHSFSGRSEKSKPTLEARDKSSETPHSEGPLPASPSGSGLGDIITLENDSDGGEPVDGSS
ETRNEPEENDSVPSALGRDGEDEPVSLSDLSSSFQKCFQSLNQNRKTREVEKSQESGGLQ
VKPFDYEAAKSQVIFGAKPVREAGAAEGVKSLNSAGKKKSLAGLVSNDDGSKELGQGRRR
QAFPATGNRSATFR
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgagccaagacgccgtgaccatggaccaatctccgccgccgcagacgaactccgacgcc
ctccaaaccctaaccaagggtgctctctcctcgtcgatttccaagctctccggctcgtcg
cgattcttgcctaacagcaaggacttctatttctaccgcaacttcgacgaattcagagtc
ccgatcgagcaaatcaccaaggaatcgcagacgatgcttggctcgattggctcgtcggcg
ccggtttggaggaaaccggtggctttccccgatgacttggacgacgcgtacgattggctc
gttaatgtgaacgacgaggctctggagaggtttgactcgtcggtggacgagttcaagatt
gtgaggaaggaggtggaggaggccaagcggccgacgagtgcggctatggacacagacgat
gggtttcaattggtgtgtgggaaaaagaagaaggggcctactgggtcagcagcggccagt
gggaacgatgattcgagtcaggtatcctctgcggtgaaggtggcttccaaggacaagaaa
actgtggtcgcgacgaagccgaaagtgccgtttcatataccgagcattcggaggcctcag
gaggagtttaacattttggttaataatgcaaaccagccgtttgagcatgtttggttgcag
agaagtgaggacggtcaacagtttcttcatcccctagagaagctttctgttctggatttt
gttgacaacaacattggggatgttgagtctgtaaaaccggcttcattagagtccacgcca
ttcaagcttgtggaggaggtcaaagatctgaaggagctcgcagctaagctccgtgctgtt
aatgaatttgcggttgatttggaacacaatcaatatcgatcttttcaaggattgacttgc
ttgatgcaaatttcaactagaaccgaagattttattgtagatactctgaagcttagaatt
catgttgggccatatcttagggaagttttcaaagaccctgccaagagaaaggtgattcat
ggagcagatcgtgatatcatgtggcttcaacgtgattttggcatttatatctgcaatttg
tttgatactggccaggcttcgagggtgttgaaattggagagaaatagtttggagtatctt
ctacagaacttatgtggtgttactgccaacaaagaataccagaatgcagactggagatta
cgccctctgcctgaggagatgatcagatatgccagagaagatacacactatttattgcat
atgtatgatttaatgagaacacagttatgtctgatgcccaaggaatcagaaaactctgac
actcctttagtggaggtttacaaacgcagttatgatctatgcatgcatctatatgagaaa
gagcttttgacagaaaattcttatctccacatatacgggttgcaaggtgctggtttcaat
tctcagcagcttgccattgtttccggtctttgtgagtggagggatgttgttgcccgtgca
gaggatgaaagtactggctatatattaccaaacaaaactcttcttgaaattgctaaacag
atgcctgtcaccactagcaagttaaagcgattggtgaaatcaaagcacccgtacatggag
cgtaatcttggttcagttgttagtatcattagacattctatgcaaaatgctgcttttttt
gagcctgctgtcgaacatctgaaggtggcacgtgcaggaatggcatctgaagagaatata
ttggtcaatgatggatctgaagccttgttacctgatcagtctgtcagcaattcgagtaat
ggtgatttatctgtagtttcacccccgtctcagcagcatagaatggagtataaggggatt
gcatttggtgcctctgaacttgtaagaaatggacaaggaaactctcctgaaactggcagt
cccatttcggtgaatcttaggcagaacagtgttccaggacaaagcagagaagcaaggagc
aatgcctgtttattggattcagcaaaggttactggagtaagtgttcaggtgcaaaagaag
cccagccgtgcctttagttcactgttggggagtgcagttccaaaaaggaaggtcgatgtc
gataaaaagggcaaggaagataataagttggaacaaattagatcttcagtgaacttccca
ttccactcattttcgggcaggagtgagaaatccaaaccaaccttggaagcacgagataaa
agttcagaaactccccattctgaagggccgcttcctgcatcaccctctggttctggttta
ggtgacatcataacattggaaaatgattcagatggaggtgaaccggtagatggttcctca
gaaaccagaaatgagccggaggagaatgattcggtaccatctgctttggggagggatggg
gaagacgaacccgtgtctctctctgatttgtcgtcgagcttccaaaaatgctttcagtcg
cttaaccaaaacaggaagacaagagaagtggagaagtcccaggaatctggtggtttgcag
gtgaagcctttcgactatgaggcagcaaagagtcaggtcatattcggagctaagccggtc
agagaggctggagctgcggaaggtgtgaagagcttaaactcagcgggaaagaaaaaatct
ttagctggtctagtttcaaacgatgacgggtcaaaagaactaggacagggtagacgacgc
caagcttttccagcaaccggaaatagaagtgcgacatttcgttaa

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