Pyrus communis (pear): 137713200
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Entry
137713200 CDS
T10779
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137713200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137713200
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
137713200
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Paralog
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Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
137713200
NCBI-ProteinID:
XP_068308573
LinkDB
All DBs
Position
13:529965..536785
Genome browser
AA seq
914 aa
AA seq
DB search
MSQDAVTMDQSPPPQTNSDALQTLTKGALSSSISKLSGSSRFLPNSKDFYFYRNFDEFRV
PIEQITKESQTMLGSIGSSAPVWRKPVAFPDDLDDAYDWLVNVNDEALERFDSSVDEFKI
VRKEVEEAKRPTSAAMDTDDGFQLVCGKKKKGPTGSAAASGNDDSSQVSSAVKVASKDKK
TVVATKPKVPFHIPSIRRPQEEFNILVNNANQPFEHVWLQRSEDGQQFLHPLEKLSVLDF
VDNNIGDVESVKPASLESTPFKLVEEVKDLKELAAKLRAVNEFAVDLEHNQYRSFQGLTC
LMQISTRTEDFIVDTLKLRIHVGPYLREVFKDPAKRKVIHGADRDIMWLQRDFGIYICNL
FDTGQASRVLKLERNSLEYLLQNLCGVTANKEYQNADWRLRPLPEEMIRYAREDTHYLLH
MYDLMRTQLCLMPKESENSDTPLVEVYKRSYDLCMHLYEKELLTENSYLHIYGLQGAGFN
SQQLAIVSGLCEWRDVVARAEDESTGYILPNKTLLEIAKQMPVTTSKLKRLVKSKHPYME
RNLGSVVSIIRHSMQNAAFFEPAVEHLKVARAGMASEENILVNDGSEALLPDQSVSNSSN
GDLSVVSPPSQQHRMEYKGIAFGASELVRNGQGNSPETGSPISVNLRQNSVPGQSREARS
NACLLDSAKVTGVSVQVQKKPSRAFSSLLGSAVPKRKVDVDKKGKEDNKLEQIRSSVNFP
FHSFSGRSEKSKPTLEARDKSSETPHSEGPLPASPSGSGLGDIITLENDSDGGEPVDGSS
ETRNEPEENDSVPSALGRDGEDEPVSLSDLSSSFQKCFQSLNQNRKTREVEKSQESGGLQ
VKPFDYEAAKSQVIFGAKPVREAGAAEGVKSLNSAGKKKSLAGLVSNDDGSKELGQGRRR
QAFPATGNRSATFR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagacgccgtgaccatggaccaatctccgccgccgcagacgaactccgacgcc
ctccaaaccctaaccaagggtgctctctcctcgtcgatttccaagctctccggctcgtcg
cgattcttgcctaacagcaaggacttctatttctaccgcaacttcgacgaattcagagtc
ccgatcgagcaaatcaccaaggaatcgcagacgatgcttggctcgattggctcgtcggcg
ccggtttggaggaaaccggtggctttccccgatgacttggacgacgcgtacgattggctc
gttaatgtgaacgacgaggctctggagaggtttgactcgtcggtggacgagttcaagatt
gtgaggaaggaggtggaggaggccaagcggccgacgagtgcggctatggacacagacgat
gggtttcaattggtgtgtgggaaaaagaagaaggggcctactgggtcagcagcggccagt
gggaacgatgattcgagtcaggtatcctctgcggtgaaggtggcttccaaggacaagaaa
actgtggtcgcgacgaagccgaaagtgccgtttcatataccgagcattcggaggcctcag
gaggagtttaacattttggttaataatgcaaaccagccgtttgagcatgtttggttgcag
agaagtgaggacggtcaacagtttcttcatcccctagagaagctttctgttctggatttt
gttgacaacaacattggggatgttgagtctgtaaaaccggcttcattagagtccacgcca
ttcaagcttgtggaggaggtcaaagatctgaaggagctcgcagctaagctccgtgctgtt
aatgaatttgcggttgatttggaacacaatcaatatcgatcttttcaaggattgacttgc
ttgatgcaaatttcaactagaaccgaagattttattgtagatactctgaagcttagaatt
catgttgggccatatcttagggaagttttcaaagaccctgccaagagaaaggtgattcat
ggagcagatcgtgatatcatgtggcttcaacgtgattttggcatttatatctgcaatttg
tttgatactggccaggcttcgagggtgttgaaattggagagaaatagtttggagtatctt
ctacagaacttatgtggtgttactgccaacaaagaataccagaatgcagactggagatta
cgccctctgcctgaggagatgatcagatatgccagagaagatacacactatttattgcat
atgtatgatttaatgagaacacagttatgtctgatgcccaaggaatcagaaaactctgac
actcctttagtggaggtttacaaacgcagttatgatctatgcatgcatctatatgagaaa
gagcttttgacagaaaattcttatctccacatatacgggttgcaaggtgctggtttcaat
tctcagcagcttgccattgtttccggtctttgtgagtggagggatgttgttgcccgtgca
gaggatgaaagtactggctatatattaccaaacaaaactcttcttgaaattgctaaacag
atgcctgtcaccactagcaagttaaagcgattggtgaaatcaaagcacccgtacatggag
cgtaatcttggttcagttgttagtatcattagacattctatgcaaaatgctgcttttttt
gagcctgctgtcgaacatctgaaggtggcacgtgcaggaatggcatctgaagagaatata
ttggtcaatgatggatctgaagccttgttacctgatcagtctgtcagcaattcgagtaat
ggtgatttatctgtagtttcacccccgtctcagcagcatagaatggagtataaggggatt
gcatttggtgcctctgaacttgtaagaaatggacaaggaaactctcctgaaactggcagt
cccatttcggtgaatcttaggcagaacagtgttccaggacaaagcagagaagcaaggagc
aatgcctgtttattggattcagcaaaggttactggagtaagtgttcaggtgcaaaagaag
cccagccgtgcctttagttcactgttggggagtgcagttccaaaaaggaaggtcgatgtc
gataaaaagggcaaggaagataataagttggaacaaattagatcttcagtgaacttccca
ttccactcattttcgggcaggagtgagaaatccaaaccaaccttggaagcacgagataaa
agttcagaaactccccattctgaagggccgcttcctgcatcaccctctggttctggttta
ggtgacatcataacattggaaaatgattcagatggaggtgaaccggtagatggttcctca
gaaaccagaaatgagccggaggagaatgattcggtaccatctgctttggggagggatggg
gaagacgaacccgtgtctctctctgatttgtcgtcgagcttccaaaaatgctttcagtcg
cttaaccaaaacaggaagacaagagaagtggagaagtcccaggaatctggtggtttgcag
gtgaagcctttcgactatgaggcagcaaagagtcaggtcatattcggagctaagccggtc
agagaggctggagctgcggaaggtgtgaagagcttaaactcagcgggaaagaaaaaatct
ttagctggtctagtttcaaacgatgacgggtcaaaagaactaggacagggtagacgacgc
caagcttttccagcaaccggaaatagaagtgcgacatttcgttaa
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