Pyrus communis (pear): 137713503
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Entry
137713503 CDS
T10779
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcox Pyrus communis (pear)
Pathway
pcox03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137713503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137713503
03036 Chromosome and associated proteins [BR:
pcox03036
]
137713503
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137713503
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137713503
PBAF complex
137713503
GBAF(ncBAF) complex
137713503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
137713503
NCBI-ProteinID:
XP_068308906
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Position
13:19878462..19881512
Genome browser
AA seq
565 aa
AA seq
DB search
MELAPHDPGSNPLRPDEPELELYSIPRHSGWFLWDEIHETERIALKEYFDGSSISRTPKT
YKEYRDFIINKYREDPSRKLTFTEVRKSLVGDVSLLHKVFNFLEKWGLINFGANSGGGGG
FVAGGDERCKVKVEDGVPNGIRVAAMPNSIKPISQVSGQPKVGEVGGGGGVSRVGFPPLA
SYSNVFGDLKKEGLVCGNCGGHCDSGHYEYSKGDFLICVKCFENGNYGEKENKPRDDFQL
KEAVEKSSTNGAEWTESETLLLLESVFKYGDDWELVAQNVQTKTKFDCIAKLIDLPFGEL
VLGSAYRKDNSNGFSANLDSTEQVQLSSTGCQETMITKGQLHEQTDDGKQNRDTLSEGSP
LKRQRIASLSDASTSLIKQVAAISTMVGPQITAAAADAAINVICEETSCSREIFDTDDDS
LTNGVWSPAKNCETERVQDRDSEMKEKPAGSESQDALFRKDDIPPTLQIKAAIGTTLGAA
AAHSKLLADQEDRQIEYLMATIIGTQMKKLHFKLDYVKDLEQIMKKEHAQIEDTEEFLVQ
ERINVLQRTLDSSVPRWRGHPAMKS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgctccacacgacccgggttctaatccgctccgacccgacgaaccagagctc
gaactctactccatcccacgccactctggctggtttctgtgggatgagattcatgaaact
gagagaattgcgttgaaggagtattttgatgggagctcgatctcgagaactccgaaaacg
tacaaggaatacagggattttatcattaataagtacagggaagatccttctaggaagctt
acattcactgaggttagaaagtcgcttgtgggtgatgttagtttgcttcataaggtgttt
aatttcttggagaagtgggggttgattaatttcggtgcgaattcaggtggtggagggggt
tttgttgctgggggtgatgagaggtgtaaggttaaggttgaggatggagttcccaatggg
atccgggtggctgcaatgccgaattccattaaacccatttcgcaggtttcgggtcaacct
aaagttggggaggttgggggtggaggaggtgtgagtagagttgggtttcctccgttggca
tcatactctaatgtttttggtgatttgaagaaggaggggttggtttgtggaaactgtggg
ggacattgcgattctggacactacgagtatagcaagggtgattttctgatttgcgtaaag
tgttttgaaaatggaaactatggggagaaggagaacaaaccgagggatgatttccagtta
aaagaggcagttgaaaagagcagtactaatggagctgaatggactgaatcagaaacccta
ttacttttagaatctgttttcaagtatggggatgattgggagcttgttgctcaaaatgtt
cagacaaagaccaaatttgattgtattgctaagctcattgatctaccttttggggagctt
gtattgggttctgcttacagaaaagacaattctaatggctttagtgctaatttggactct
acggagcaagttcagttatcttcaacagggtgtcaagagactatgataaccaagggtcag
ttgcatgagcagacagatgatggcaagcagaacagagacactttgagtgaaggttcacct
ttgaaaagacagcgcattgcttctctttcggatgctagtacttcactgattaaacaggta
gctgccatatcaaccatggttggtccacaaatcacagctgccgcagctgatgcggccatt
aatgtgatttgtgaggaaacctcatgttcaagggagatatttgatactgatgatgattct
cttactaatggcgtgtggtctcctgctaaaaactgtgagacagagagagtccaagacagg
gattcggaaatgaaggaaaagccagccggatcagagagtcaggatgcactcttcagaaaa
gatgacatacctccaactttgcaaattaaagctgccattggaacaactcttggagcagct
gccgctcactcaaaattattggctgatcaggaggatagacagattgaatatctcatggca
accataattgggacgcagatgaaaaagctgcacttcaaactggattacgtcaaagatctg
gagcagatcatgaagaaggaacacgctcaaattgaagacacagaagagtttctcgtacaa
gagcggattaatgtcttgcaaagaacactcgactccagtgtacctagatggaggggtcat
cccgctatgaaatcttga
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