Pyrus communis (pear): 137713697
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Entry
137713697 CDS
T10779
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137713697
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
137713697
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
UBA_RAD5A
CUE
Motif
Other DBs
NCBI-GeneID:
137713697
NCBI-ProteinID:
XP_068309135
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All DBs
Position
13:complement(8381224..8388379)
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AA seq
292 aa
AA seq
DB search
MNGGPSGFHNAPITRAFVVASGLFTVFFGIQGRSSKLGLSYLDIFGKFRLWKLIVSVFAF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILYSVTVSLLFEILALAILKDPAVNLFTS
GPYGLIFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWKRSIIPGIFGVV
CGSLYHLNVFSIRKAKFPEVIASFFSRISWPSMGTPPAAPSRNVVGNAPPFTARQVERNY
PSSMLSATEPTEDSIGTLVSMGFDRNSARQALVQARNDVNVATNILLEAQAR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggtccatctggtttccacaatgctcctattaccagagccttcgtcgttgcc
agcggtctcttcaccgtcttctttgggatccagggccgttcgagcaagcttggattgtct
tatctggacatattcgggaagtttcgcctttggaagttaattgtgtcagtgtttgccttt
tcatctacaccagaactgatgtttgggctgtatctgctatactacttcagggtctttgag
agacagataggttccaataagtactcagtgttcatattgtactctgtgacggtatcttta
ctatttgagattcttgctctagcaatccttaaagatccagcagtcaacctatttacttca
ggaccttacggtcttatatttgcatcttttgtaccctttttctttgatattccagtttca
acacgctttcgtgtatttggtgttcgcttctcagataagtctttcatatatctagccggt
ctacagcttcttttatcatcctggaaacgatcaatcataccggggatatttggagtcgtt
tgtggttccttatatcatctaaatgtcttctctatccgcaaagcaaagttcccagaagtc
attgcctctttcttttcaaggatttcttggccatcaatggggactccaccagcagcacca
tctagaaatgttgtgggaaatgcaccaccattcacagctcggcaagtagagagaaattat
ccctcttccatgctgtctgcaacagagccaacagaggactccattggtactctggtttct
atgggctttgataggaactctgccagacaggcactagtgcaggctagaaatgacgtcaat
gtagcaacaaacatccttctagaagcacaggcccgctaa
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