Pyrus communis (pear): 137713866
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Entry
137713866 CDS
T10779
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03030
DNA replication
pcox03420
Nucleotide excision repair
pcox03430
Mismatch repair
pcox03440
Homologous recombination
pcox03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137713866
03420 Nucleotide excision repair
137713866
03430 Mismatch repair
137713866
03440 Homologous recombination
137713866
03460 Fanconi anemia pathway
137713866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcox03000
]
137713866
03032 DNA replication proteins [BR:
pcox03032
]
137713866
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137713866
Transcription factors [BR:
pcox03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137713866
DNA replication proteins [BR:
pcox03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137713866
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137713866
MMR (mismatch excision repair)
137713866
DSBR (double strand breaks repair)
HR (homologous recombination)
137713866
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
BRC-2_C
YIEGIA
YafT
Motif
Other DBs
NCBI-GeneID:
137713866
NCBI-ProteinID:
XP_068309320
LinkDB
All DBs
Position
13:23743311..23746642
Genome browser
AA seq
604 aa
AA seq
DB search
MAKLMPTPDAISTILANKSPDESVELPEIVVQVSDLIPRGKSFMFTATDGNAKLKGMLSS
RLGPQVTSGEIQNLGLIRVLGYSVNFNPNLSENYLLVTKCDVVSAALEAEVKNEVKKEDV
GIILKPKQEMASKSVAQIVHEQAGNMAPSARMAMTRRVHPLVSLNPYQGIWTIKVRVTSK
GTMRTYKNARGEGYVFNVELTDEDGTQIQATMFNEAAKKFFEKFELGKVYYISKGSLRVA
NKQFKTVQNDYEMTLNEYSEVEEASNEAAFVPETKFNFVPVDMLGPHVNGKELVDVIGVV
QNVSPTMSIRRKINNESIPKRDITIADDTKKTVVVALWGELATSVGQQLLDIADQSPIVA
IKSLKVGDFQGVSLSTLSRSTILVNPESPEAKKLRSWYDSEGRGASLASVGSGMSPLAKS
GGRSMYSDRVTLSHISEDPSLGEDKPVFFSVKAFISSIRPDQAMWYRACKTCNKKVTEAI
GSGYWCEGCQKNDEECSLRYISVARVTDVSGETYLSLFNDEAESVIGCSADELDRLKSQD
GDDNKFQQKLKEATWVPHLFRVSVTLNEYNNEKRKRITARAVAPVDFAAESRFLLEEISK
MKAS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagttaatgccgaccccagatgcgatttcaaccatcttggcgaacaagtcgccg
gacgagtcggttgagctgccggagatagtggtccaggtctccgatcttatccctagggga
aaatctttcatgtttactgctactgatggaaatgcgaagctaaaggggatgctttcctcg
aggctgggtccccaggtcacatctggggagattcagaatctgggtctcattcgcgttctc
ggttattctgttaatttcaatccaaacttgtctgaaaattatctgcttgtaacaaaatgt
gatgtagtttcggctgcacttgaggcggaggtgaaaaatgaggtgaaaaaagaagatgtt
gggattatcttgaagcccaagcaagaaatggcatcgaaatctgttgcccaaattgtgcat
gagcaggctgggaatatggctccgtctgcgagaatggctatgacacgaagggttcacccg
cttgtttccttgaacccttaccaaggaatttggaccataaaggttcgtgttacaagcaag
ggtacgatgcgtacatacaagaacgctagaggtgaaggttacgtcttcaatgtggagtta
acagatgaagatggaacacaaattcaagcaacaatgtttaatgaagctgcaaagaagttc
tttgaaaagtttgagttaggaaaggtttattacatttcaaaggggtctctgagggttgct
aacaagcagtttaagacagtgcaaaatgattatgaaatgacattaaatgagtattctgag
gtggaagaagctagcaatgaagcggcttttgttcccgaaacaaaattcaattttgttcca
gttgacatgttgggtccccatgttaatggaaaggagcttgtggatgttattggagttgtt
caaaatgtgtctcctacaatgagcattagaaggaagatcaacaatgagagtattccaaag
cgtgatatcaccattgctgatgatacgaagaagacagttgtggttgctttgtggggtgag
cttgcaactagtgtaggccagcaattgcttgacattgctgatcaatctcccatagtcgct
atcaagtccctcaaagttggagacttccaaggtgtatcattgtcaacactgagcaggagc
acaatattggtaaatccagagtcacctgaagcaaagaagttgcggtcctggtatgattct
gaaggtagaggtgcttcattggcctctgttggctctggtatgagcccattagccaagagt
ggaggaaggtccatgtactctgacagagtcaccctgtctcatatatccgaggacccgtcc
ttgggtgaggataagcctgtttttttcagtgttaaagcattcataagttcgatcaggcct
gatcaggcaatgtggtaccgtgcttgcaaaacttgcaacaagaaggtgactgaagctatt
ggttctggatactggtgtgaagggtgccagaaaaatgatgaagaatgcagtttaaggtat
atatcagttgcaagagttactgatgtaagtggggaaacatatctttcgctgttcaatgac
gaagctgagagtgtcatcgggtgctctgcagatgaactggacagattgaaatcacaggac
ggagacgacaataaattccaacaaaaactgaaagaagcaacttgggttcctcatcttttt
agggtcagtgttaccctgaatgagtacaataacgagaagcggaagaggataactgccagg
gctgttgctccggttgattttgctgctgaatcgaggtttttgcttgaagagatatcgaag
atgaaggcctcataa
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