Pyrus communis (pear): 137713895
Help
Entry
137713895 CDS
T10779
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcox Pyrus communis (pear)
Pathway
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137713895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137713895
03009 Ribosome biogenesis [BR:
pcox03009
]
137713895
04131 Membrane trafficking [BR:
pcox04131
]
137713895
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcox04147
]
137713895
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
137713895
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
137713895
Membrane trafficking [BR:
pcox04131
]
SNARE
SNARE associated proteins
Others
137713895
Autophagy
Aggrephagy
Other aggrephagy associated proteins
137713895
Exosome [BR:
pcox04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137713895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
NPHP3_N
TIP49
RNA_helicase
AAA_28
AAA_17
Parvo_NS1
Mg_chelatase
nSTAND3
AAA_lid_PRS2_C
AAA_18
IstB_IS21
AAA_7
ABC_tran
AAA_24
Viral_helicase1
ATPase_2
NACHT
TsaE
Vps4_C
Sigma54_activat
DUF815
NB-ARC
ResIII
SLFN-g3_helicase
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
137713895
NCBI-ProteinID:
XP_068309348
LinkDB
All DBs
Position
13:complement(21615909..21619938)
Genome browser
AA seq
819 aa
AA seq
DB search
MAPPSPSAPDRSQPSSSSDPKSNKKDFSTAILERKKSPNRLVVDEAVNDDNSVISLHPAA
LEKLQFFRGDTVLIKGKKRRDTICIIIADDECEESKIRMNKVVRANLRVRLGDVVSVHPC
PDVKYGKKVHILPIDDTIEGVTGSLFDAYLKPYFVESYRPMRKGDLFLVRGMMRSVEFKV
METDPAEYCIVAPDTEIFCEGEPVKREDEERLEDVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGTGKTLIARAVANETGAFFLLINGPEIMSKMAGESESNL
RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKRMKLADDVDLERVAKDTHGF
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTSLSSTNPSALRE
TVVEVPNVSWDAIGGLNNVKRELQETVSMPVEHPEMFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIASECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR
GNSVGDAGGAGDRVLNQLLTEMDGMNAKKTVFIIGATNRPDILDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPISKDIDLAALARYTHGFSGADITEICQRACKYAIREDIEKD
IERERRKNANPEAMEEDEIDEVAEIKPAHFEESMKYARRSVSDADIKKYQLFAQTLQQSR
GFGSEFRFPAQQTENNAGEAALSPFSSAAVAGEEADLYD
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctccgagtccatctgctcctgatcgttctcagccctcttcgtcttcggacccg
aagagcaacaagaaagatttttcgactgctatcttggaacgaaagaagtctcctaatcga
cttgttgtcgatgaagctgtcaatgatgataattctgtgatttccttgcaccctgctgca
ctggagaagcttcagtttttccgcggagacactgttttaattaagggcaagaaaaggaga
gacacaatttgcatcattattgccgatgatgaatgcgaggaatcgaaaatcagaatgaac
aaagttgtgagagctaatcttagggttcgccttggagatgttgtgtctgttcatccctgc
cctgatgtcaagtatggaaagaaggttcacatccttccaatcgatgatacaattgaagga
gtgacaggaagcttattcgatgcatatttgaagccatacttcgttgaatcttaccggcct
atgaggaagggtgatcttttcctggttcggggcatgatgcgaagcgttgagttcaaggtc
atggagacagaccctgctgagtactgcattgttgcgccagatactgagattttctgtgag
ggagagcctgtcaaacgtgaagacgaggaaagactagaggatgtgggatatgatgatgtt
ggaggtgttagaaagcaaatggcccagatacgcgagttagtagaactgcctcttagacat
ccgcagctcttcaaatcgattggagtaaaaccccctaaaggcattttactctatggccca
ccggggactggaaaaactttgattgcaagggctgtagcgaatgagactggagcgttcttc
cttttgattaatggacctgaaataatgtccaagatggcaggtgaaagtgaaagtaacttg
aggaaggcgtttgaggaagccgaaaagaatgcaccctcaatcatttttattgatgagata
gattctattgctccaaagagagaaaagacccacggtgaagtggaaaggcgtatagtttcc
cagcttctgactttaatggatggccttaagtcccgtgcgcatgtcattgtcatgggagca
acgaataggccaaacagcatcgaccctgctctgaggagatttggaagattcgatagagag
attgacattggtgtgccggatgaagttggaagattggaagttttacgaatccatacaaag
aggatgaaacttgcagacgatgttgatctcgaaagagttgcaaaagatacccatggtttt
gttggtgcagatcttgctgctctctgcacagaggccgcactccagtgcatccgcgaaaaa
atggatgttattgatttggaagacgaaacgattgatgctgaggtgttgaattcgatggct
gtgacaaatgaacacttccagacctcgttgtcctctacaaatccctctgccttgcgcgaa
actgttgtggaggtaccaaatgtctcatgggatgccattggtgggttgaacaacgtcaaa
agagaacttcaagagactgtttcaatgcccgtggagcatccagaaatgtttgagaaattt
ggcatgtcgccttccaaaggcgttctcttttatggaccgcctggctgtgggaaaactctt
ctcgccaaggcaattgccagcgaatgtcaggccaacttcatcagtatcaaagggcccgag
ttgctaacaatgtggttcggagaaagtgaggcaaatgtgcgcgagatatttgacaaggct
cgccaatctgctccttgtgttctcttctttgatgagctagactcaattgcaactcagcgt
ggaaattctgtgggagatgccggtggtgctggagacagagtcttgaaccaacttctaact
gaaatggatggaatgaacgcaaagaaaaccgtctttatcattggggcaacaaacaggcca
gatattcttgacccggcattgctcaggcctggacgtcttgaccaacttatctacatccca
ctcccagatgaggcttcgcgccttcagatttttaaagcatgtttgcgcaagtcccccatc
tctaaggatattgacctagcagctcttgcccgttatacgcacggttttagtggtgcagat
atcactgagatatgtcaacgtgcctgcaaatatgccatcagagaagacattgagaaggat
attgagagggaaagaagaaagaatgctaaccccgaagccatggaagaagatgaaattgat
gaggtagccgagatcaagccagcacactttgaggaatcgatgaaatatgcccgaagaagt
gtgagtgatgcagacatcaagaagtaccagctatttgctcagactttgcagcaatctcgt
gggtttggatccgaatttcgatttcctgctcaacagacagagaacaatgcaggagaagct
gctctatccccattttcttcggccgcagttgctggagaggaagctgatctctatgattga
DBGET
integrated database retrieval system
