Pyrus communis (pear): 137713982
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Entry
137713982 CDS
T10779
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137713982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137713982
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137713982
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
137713982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
137713982
NCBI-ProteinID:
XP_068309443
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Position
13:complement(17195285..17197695)
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AA seq
309 aa
AA seq
DB search
MEEDSFVDSLTTYDGIDEGEDTYHCSRRSCHRRRRFLAPAKSNNRALSPATTVRELLECP
VCSKSMFPPIHQCPNGHTLCSICKLTVNRCPACREKLGDIRCLALEKVAESLELPCKYCS
LGCMEIFPYYIKLRHEAHCNYRPYSCPYPGSDECSEVGDVPFLVDHLREDHKVDLHVGPT
FNHLYVKSNRLEVECAARMLMVFNCYNKYFCLHFEAFHLGIAPVYIAFLRFMGDAAEARS
FSYRLEVGSNGRKLIWEGTPRSIRDSHQKVRNSHDGLIIQRNMALFFSGGDRKELKLRIS
GRIWKDNGN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacagttttgttgatagtttgacaacatatgatgggatcgatgagggagaa
gacacttatcactgcagccgacgctcttgccaccgccgccgccgtttcttggcaccggcc
aagtccaacaacagagcattgagtccagccacaacagttcgtgagcttcttgaatgccct
gtctgctcaaagtccatgttcccaccaatccaccagtgcccaaatggtcacactctttgc
tcaatctgcaagctgacggtgaaccggtgcccggcgtgtcgagaaaaactcggagacatt
cgatgtctggcgttggagaaggtggcagagtcactagaacttccatgcaagtattgttct
ttagggtgcatggagatcttcccttactacatcaaactcaggcatgaggctcactgcaac
tacagaccatacagttgcccttatcctggatctgatgagtgctcagaggttggggatgtt
ccttttttggttgaccatctgagagaagatcacaaggttgacttacacgttgggcctacg
tttaatcacctctatgttaagtcgaatcgcctcgaagtggagtgtgcagcaaggatgctt
atggtgtttaactgttacaacaagtacttctgtctgcactttgaagccttccacctcggc
atagctccggtctacattgcattccttcgcttcatgggcgacgcagctgaggcacgaagc
ttcagctacagactggaggtgggcagcaacggcaggaaactaatatgggaaggaacccct
cggagcatccgtgacagccatcagaaggtcaggaacagccatgacggtctcataatccag
cgtaacatggcactgtttttctcgggtggagacaggaaggagctcaagcttcggatctct
ggccggatttggaaggacaacggcaactag
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