Pyrus communis (pear): 137714908
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Entry
137714908 CDS
T10779
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcox03009
]
137714908
04121 Ubiquitin system [BR:
pcox04121
]
137714908
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137714908
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
137714908
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137714908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
zf-RING_2
HEAT_GCN1
zf-rbx1
zf-C3HC4
FANCL_C
zf-ANAPC11
ParcG
zf-C3HC4_2
zf-RING_16
RINGv
IBR_1
Motif
Other DBs
NCBI-GeneID:
137714908
NCBI-ProteinID:
XP_068310170
LinkDB
All DBs
Position
14:complement(3920980..3931729)
Genome browser
AA seq
1903 aa
AA seq
DB search
MGKQKGDAARSKARPSSSSLAASLVPSGSTATVGFGGYVGGSRLEASLPSEDSTPYVDVD
SELALHLKRLARKDPTTKLKALASLSALLKEKSTMDITPIIPQWAFEYKKLVVDYNRDVR
RATHDTMNNLVTAVGRDLAPHLKSLMGPWWFSQFDRLSEVAQAAKRSLQAAFPAQEKRLD
ALILCTAEVFTYLEENLRLTPQSMSEKATAVDELEEMHQQVISSSLLALATLLDVLVCKQ
QGRPDSEKINAPPKHALKARETAISFAENLFTAHKYFVDFLKSPISAIRSATYSVLSSFI
RNIPHAFSEGNMKTLAAAVFGAFQETDPACHSSMWDAVLLFSKRFPDSWTSINVQKVVLN
RFWNFLRNGCFGSQQISYPALLPFLDTVPSKAVVGETFLLEFFQNLWAGRNPSHSLNADR
LAFLGAFKDCFLWGLRNAPRYCDKVDSISPFQVNLVKNVLVKLLWRDYLFASSSKHKEKT
LSRLSADSCESGLISNEKTMGTLNIMYPMSYLRELGNCIVGVLSGIYSLQHDLLSAFSAE
FEENCLGLFNDDGKLGTDSEHAERIIQFISLLGEHAMQKGQSWPLGCLVGPMLSKSFPLM
RSHDSPNCVKILSVAVSVFGPRKIVQKLLIQKNLSWDHSIDRGDKEAEADLFMQIFKEKF
VPWCLHGNSCSLSARLDLLFSLFDDEYFSEQWDIVIRYVTALEHSGCATSLDSDHITILS
MLLEKARDRIASTKEGEVSMGNPENWHHELLESAAVSVARSPPSGTCNSQFLCTIVGGST
KSNQTSFVSRNTLILIFEEVFKKLLSFILASSFTWVRNAGTLLSPNLLTSVENCIGPEYE
SSVTMFEMAQFALGVLDGAFFSLKKLGEESGLVPVILSAVFIIDWEFLLLLTTIDDAPHD
ESKEKLKARLGFGESFHAFRCKISNQFWKSLGLHNRQALGNILIQSMRSAIFIEDKLDTE
KFTSLCCLWMLEVLDCVSQDQYEEQNLLDQLLCKGDSWPLWIVPNFSSPEGLVLKNSSAD
IQDFGHRKFVSFIYKIISEVGIDRVVAGHIKHSLPPSQGTTNEGLTRSWLACEILCTWRW
PGGSAVSSFLPSLSAYAKSRNYSSQESLLDFIFNILLDGALIHGGCDAQSFVYLWPASND
EVEDIEEPFLRALVAVLFTLFNDNIWEREKAVMLLELLVNKLCVGEAINANCLRILPLIV
NVLIRPLSQRSIKPNDEETQPDSSGENRVQDIIEGWLQKAVSFPPLITWQTGQDMEDWLQ
LVIACYPFGTLGDIQTPKLERNVSSAERTLLLELFRKQRGPGTSTVINQLPVVQTLLSRL
MVISVGYCWKEFNEEDWEFVLSQLRRWIQSAVVMMEEIAENINDIITSRLPSDNLDAVLN
KLGKIVYISDSFTIDIAKNALLSFSLCCGPFGLQQAEDADNINPLRTERWDPIKDRILEG
ILRLFFCTGIAEAIARSCCDEAASLISSSRFEHSHFWELVASNVVNSSTNARDRAVKSIE
FWGLSKGAISALYAILFSSKPVPLLQFAAYSIISSEPVLQFAIVEDKTSLDSVTNGEEDS
SLLDISTETSIHLKEEISCMIEKLPYKVLEMDLVAEQRVHVFLAWSLLLSHLWSLPSSSP
ARERLVQYIQDSASSVILDCLFQHIPLELCMAPLLKKKDTALPAGIAEAAAAATHAIKTG
SVLFSVQSLWPVEPVKIALLSGAMFGLMLRILPAYVRQWFSDLRDRSTSSAIESFTRSWC
SPPLITNELSLIKKDEITDENFSIIVSKSANEVVATYTKDETGLDLVIRLPSSYPLRPVD
VDCRRSLGISEVKQRKWLMSMASFVRNQNGALSEAIKIWKRNFDKEFEGVEECPICYSVI
HTANHSLPRLACKTCKHKFHSACLFKWFSTSHKSTCPLCQSPF
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacagaaaggagatgcagctaggagcaaggcacgcccttcaagcagcagtctg
gcggcgtcgctggtgccgtcgggttctactgccacggtgggcttcggtggctacgtcggc
ggttctcgcctcgaggcttccctccccagcgaagattctacgccctatgtggacgtagat
agtgaattggctctacatttgaagaggctcgcaaggaaagatccgaccaccaagcttaaa
gctttggcatctctatccgccctgctcaaggaaaagtccacaatggacataacaccaatc
attccgcaatgggcatttgaatacaaaaagcttgtggtggactacaatagggatgttcgg
cgagcaactcatgacacgatgaacaatcttgtcactgctgttgggagagatttagctcca
catctaaagtctctgatggggccatggtggttttctcaattcgaccgactttctgaagtt
gctcaagctgcaaagcgctcattacaggcagcttttccagctcaggaaaagagactcgat
gctttaattttatgcacagcagaggtttttacctatttggaagaaaatctgaggcttacg
ccgcaaagtatgtctgaaaaagcaactgctgttgatgaattagaagagatgcatcagcag
gtgatatcttcttcacttctggcattggctacacttcttgatgtcttggtttgcaaacaa
caaggaagaccagactctgagaagataaatgctccaccaaaacatgctttgaaagctagg
gaaacagctatttcttttgctgaaaacttgttcactgctcataaatattttgtagacttc
ttgaaatctccaatttctgctatccgttcagccacatattctgtattaagtagtttcatt
agaaacattcctcatgcctttagtgaaggaaacatgaaaactcttgctgctgcagtattt
ggtgcatttcaggagacggatcctgcttgtcattcatcaatgtgggatgcagttttgcta
ttttctaaaaggtttcctgacagttggacttctattaatgtacagaaagtagtactaaat
cgattttggaattttcttagaaatgggtgctttggatctcagcagatttcttatccagct
ttactaccttttttagacactgtaccatctaaagcagtagtgggagaaacttttttgctt
gaatttttccagaacctgtgggcaggaaggaatccatctcattccttaaatgcagataga
ttagcatttcttggggcttttaaagactgctttctttggggattgcgtaatgcaccaaga
tattgtgacaaagtggattccatatctccttttcaagtaaatcttgttaaaaatgttctg
gtaaagctgttgtggcgagattacctttttgctagtagctcaaaacataaggagaaaacc
ttatccagattatcagcagattcatgtgaaagtggtttgatttccaacgagaagaccatg
ggaacattgaatattatgtacccaatgagctacttgagagagttggggaactgcattgtt
ggggttctttcaggcatttattcgctccagcatgatttgctctcagctttctctgcagaa
ttcgaggagaattgtctgggtttgtttaatgatgatggtaaattgggaacagacagtgag
catgcagaacgaattattcaatttatatcattacttggagaacatgcaatgcagaaaggt
caaagttggcctttgggttgtttagttggaccaatgttatctaagtcattcccattgatg
agatcacatgattcacctaattgtgtgaagattctgtcagttgctgtttctgtatttgga
ccacgcaagatagtccaaaagcttcttatccaaaagaatctttcttgggatcattctatt
gataggggggataaagaagcagaggcagatctattcatgcaaatattcaaggagaaattt
gttccgtggtgtttgcatgggaatagctgctccttaagtgctcggcttgatttgttattt
tcgttgtttgatgatgaatatttctctgagcaatgggatattgttatcagatatgtgact
gctctggaacattctggatgtgcaacttctttagactctgaccacataaccatattgtca
atgctcttagagaaagcaagagatcgaattgcaagcactaaagaaggagaagtatccatg
ggcaacccagaaaactggcatcatgagcttctagagtcagctgctgtttctgttgctcgt
tccccaccttccggaacttgtaattctcagtttttgtgcactattgtcggtggttcaaca
aaaagcaatcaaacatcttttgtgtcaagaaatacgttgatcctgatatttgaggaggta
ttcaagaagttgctttcttttattctggcatcctcctttacttgggttaggaatgcaggt
actctattgagtcccaatctattaacctctgtggaaaactgtattgggccagaatatgaa
agttccgtcaccatgtttgagatggctcagtttgctcttggagtacttgatggcgccttc
ttttccttgaagaaactgggtgaagaaagtgggctggttccagttatcttatcagcagtt
tttataattgattgggagtttctgttattattaacaacaatagatgatgcccctcatgat
gaatcaaaggaaaaattgaaggccaggctgggatttggtgaatcttttcatgctttccga
tgtaagataagtaatcagttctggaaaagccttggcttacacaatcggcaggcattgggg
aatattttgattcagagtatgagatctgccatatttattgaagataaactagacacagaa
aaattcacatctttgtgttgcttgtggatgcttgaagttcttgattgtgtctctcaggat
cagtatgaggaacaaaatctgttagaccaacttctttgcaagggtgatagctggcctttg
tggattgttcccaattttagtagcccagagggattagtgctaaaaaattcatctgctgat
atccaggactttggccatcgcaagtttgtttcatttatttacaagatcatctcagaagtt
gggattgatagagttgttgctggtcatataaaacatagtctccctccctcccagggaaca
acaaatgaagggcttactcgatcttggcttgcttgtgaaatattatgcacgtggaggtgg
ccaggaggaagtgctgtttcttcattcttaccttccttgagtgcatatgcaaagagtaga
aattactcttcccaggagagcttgttagattttattttcaacattttacttgatggagca
cttattcatggaggatgtgatgcacagagttttgtctatctatggcctgcttcaaatgat
gaagtggaggatattgaagaacccttcttaagagctcttgtagctgtacttttcactctg
tttaatgataatatatgggaaagagagaaagctgtgatgctgttggaactgcttgtgaat
aagctttgtgttggtgaagcaataaatgcaaactgtttgaggattcttcctctgattgtt
aatgttcttattcggccattaagtcaaagaagcatcaaacctaacgatgaagagacacag
cctgattcttctggggaaaatcgtgtacaggatattattgaaggctggcttcagaaagct
gtatcatttccacctttgatcacatggcaaacaggacaagatatggaagattggcttcag
ttggttatagcttgttatccctttggtacactgggggacatacaaacaccaaagctggag
agaaatgtcagctctgcagagagaacactcctacttgaattatttcggaagcagagaggt
cctggcacatcaactgtaattaatcagcttccagttgtgcagactttactatctcggcta
atggttatttcagttggttattgttggaaggagtttaatgaagaagactgggagtttgtg
ttatctcagttaaggcgctggattcagtcagctgttgtaatgatggaggaaattgctgaa
aatattaatgacattatcacaagccgccttccttctgataatctcgatgctgtccttaat
aagcttgggaaaattgtctatatttcagattcctttactatagacattgcgaagaatgcc
cttttatcattttctctctgttgtggaccttttggtctccagcaagcagaagatgcagat
aacataaaccccttgagaacagaaagatgggaccccatcaaagatcgaattttagagggt
atacttagattgttcttttgcaccggcattgcagaggccatcgcacgctcttgttgtgat
gaggctgcatctctcatttcatcatcccgatttgaacattcgcatttttgggagttggtg
gcctcaaatgttgtcaactcatcgacaaacgctagagacagagcagtgaagtcaatagaa
ttttgggggctcagcaaaggagccattagcgctttgtatgcaatccttttttcttcgaaa
cccgttcctttgttgcagtttgccgcttattctattatttcatcggaacctgtattacag
ttcgctattgttgaagacaaaacttctttagacagtgtcactaatggcgaagaggattca
tcccttcttgatatatcaacagaaacaagcatccatttaaaagaggaaatatcttgcatg
attgaaaagctaccatataaggttcttgaaatggacctggtggcagagcagagggtacat
gtcttccttgcgtggtctttgttgctatctcatttatggtcattaccgtcctcatcacct
gcaagggagagactcgtccagtatatacaagattctgctagttcggtgattctagattgc
cttttccagcatattcctctagaactgtgcatggcacctcttcttaagaagaaagataca
gcgcttcctgctggtatagcagaagctgcagctgcagcaacacacgccatcaaaactggt
tcagtattgttttctgtacaatctctgtggcctgttgaacctgtgaaaatagctttgctt
tctggagcaatgtttggtttgatgctccgcatccttcctgcttatgtaagacagtggttc
agtgatttacgtgatcgttctacatcctctgcaattgaatccttcacaagatcatggtgc
agcccacctctcatcacaaacgaattaagcctgattaaaaaggatgaaataactgatgag
aatttttcgattatcgtaagcaagtcagcaaatgaggttgttgctacctatacaaaggat
gagactggactggaccttgttatccgtcttccttcatcttacccgttacgaccagtcgat
gttgattgtcggaggagcctaggtattagtgaagtgaagcagagaaaatggttgatgtct
atggcgtctttcgttcgtaatcagaatggagctttatcagaagctatcaagatatggaag
cgcaactttgacaaagaattcgaaggcgtggaggagtgccctatttgttacagcgtcatc
catactgcaaaccacagccttcctcgccttgcctgcaagacctgcaagcacaagttccat
tccgcttgcctcttcaagtggttctcaacttctcacaaatcaacttgcccgttgtgccag
tctccattctga
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