Pyrus communis (pear): 137715123
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Entry
137715123 CDS
T10779
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137715123
04121 Ubiquitin system [BR:
pcox04121
]
137715123
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137715123
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137715123
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137715123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
Zn_ribbon_FGT1_2
zf-Nse
Anti-TRAP
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
137715123
NCBI-ProteinID:
XP_068310452
LinkDB
All DBs
Position
1:complement(33580584..33582544)
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AA seq
353 aa
AA seq
DB search
MSSSPTRSRDINIDDGTTPPYQLYWCYHCNRTVRIASNSPSEIVCPRCFGQFLSEFDMSI
RPRLLVDYTSFDPSPEARLLEALSLMFDQFMGPFNRGLFDPEADPGGRRRHEHEGGGTGI
EPEVRDLWTNRRRRRPRNRSFDGGENRELEPEPRTRNRPRTWIIVRPVDDPSNPVGPTSQ
SPENPMLSVPRGVTLGDYLFGPGLQGLIEELTQNDRPGPPPVPESAINAIPTVEISEAHL
INDSCCPVCMEEFKVGGEARELPCNHIYHSDCIIPWLRLHNSCPVCRVEIAVSGGGLDES
GGSNSGGERRGRRSRLGSLWPSRARYRRIEPRGGSAASTSGAGDPWWSSCNIL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagtccaactcgttcgagagacattaacattgacgacggcaccacaccaccg
taccagctctactggtgctaccactgcaatcggacggtgcggattgcctccaacagccca
tcagagatagtctgccctcgttgtttcgggcagtttctctccgagtttgacatgtcgatt
aggcctagactgctcgtagactacaccagtttcgatccatccccagaagctcgtctgctg
gaagcactttccctcatgttcgaccagttcatgggaccttttaaccgtggattatttgac
ccagaggctgatcccggaggacgacgccgccatgagcatgagggcgggggaacaggtata
gaacctgaagttcgagatttgtggacaaacaggagacggcggcggccgcgcaaccgtagc
tttgatggtggagaaaaccgggaactagaacccgaaccccgtactcgaaaccgtcccagg
acttggattattgtccgacccgtcgatgatccctctaatcccgttggacccacttcccaa
tcacctgaaaacccaatgctgtctgttccacgtggagtcactctaggagactatttgttt
gggccgggccttcaaggactgatcgaggaattaactcaaaacgacaggcccgggccgcct
ccagtaccagaatcagcaatcaacgcaataccaactgtggaaataagcgaggcccatttg
atcaacgactcctgctgcccagtttgcatggaggagtttaaggttggtggagaggcgagg
gagttgccatgcaatcacatataccacagcgattgtattattccgtggctgaggcttcac
aactcttgcccggtctgccgggtcgagattgcggtatctggtggtggattggacgagtca
gggggctcgaatagtggcggagagaggcgtggaaggcggagtcggttgggatcattgtgg
ccatctcgagcaaggtatcgtcgaatcgagccacgaggtggtagtgctgcttctacctct
ggagctggtgatccatggtggagttcttgcaatattctttag
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