KEGG   Pyrus communis (pear): 137715133
Entry
137715133         CDS       T10779                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K11797  PH-interacting protein
Organism
pcox  Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcox04121]
    137715133
Ubiquitin system [BR:pcox04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     137715133
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SCAP WDR55 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Bromodomain Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_EIPR1 WDR90_beta-prop_4th VPS8_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 137715133
NCBI-ProteinID: XP_068310470
LinkDB
Position
14:25116157..25128752
AA seq 1663 aa
MDPRKCTLSGGATSLAMAPPSILNRLNEKAQFEKEERDAGHVVEAGVDIDIREVYFLIMH
FLSLGPCQRTFEQFGNDLLEHQLLPRRFHAWFSRSRIGSDNSNEDATSFPLSYNNLVERY
PHIERDHLVKLLRQLLLSIATPLHGKVGRSTLNAADVPTLLGTGSFSLLDSDRNKENKRV
KPLPAHLRWPYMQADQIHGLSLREIGGGFTKHHRAPSIRSACYAIAKPSTMVQKMNNKKK
LRGHRNAVYCAIFDRSGRYVITGADDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA
LVASASNDFSIRVWRLPDGFPISVLQGHTGAVTAIAFSPRLSAVYQLLSSSDDGTCRIWD
ARSSQCPLRIYMPKPSETSTGKGNAFAITGSSSSNGPQSHQILCCAYNANGTVFVTGSSD
TFARVWNALKSNTDNSEQPIHEMDVLAGHENDVNYVQFSGCVIPSKSSFSDSGKEETNGK
FKNSWFCHNNIVTCSRDGSAIIWVPRSHKFHGKVGRWTRAYHLKVPPPPLPPQPPRGGPR
QRFLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTASSYVLDVHPF
NPRIAMSAGYDGQTIVWDIWEGVPIKIYELGHVKLVDGKFSADGTSIVLSDDVGQIYLIN
TGEGESQNDAEYDQFFLGDYRPLARDEFGYLIDQETQLSTYRRNLQDPLCDSSMIPYPEP
YQSTYQQRRLGALGMEWRPSSMKFSVGVDINTGQEYMMPPLPDLERMIEPLPDFIDAMLW
EPENEVVSEDTDSEYNVTDENSSEGEKGNISTSSSSDPDCSEEDSEAGCSHKDGLRRSRR
KRPRVESSERRVKKRRVGEHDRVISGIKRTKNSKGGQKVSKRKSSKAKTLRPQRVAARNA
RTVFSQNPGTSTEGEEDDWEDDSSNSESLQQDFHTQSDDGDFQIMQQKHTKEEPSQHEFG
NIAKPRVVCSSQSNVRSMPKLVFKIKKQETPKDVKLKDNNQADLVSPSSRYQDVTPDNRI
TNSSVDPDSSSVDVVQLKFSRNLLANDLTDTGETVKTDNSLEASASYQDSRVMEAATGSL
ASFNVHIEEMNNVHRYGNPDNNCEQFCNHSKMKGKENYEGVLPCRDEERTGTRAFEDLDG
LKSRELSHTDEALVSSSFDSSALGEHKQKIIVCSPEIEDFARRKHSGDYASLKFPAQNFT
SSRDTIPNDSSSMDPIPNSNFGVRKVGGGAGRSTSLKFVCKHRTNSEGSGGNVEDYATNI
NDHHDSGMDLPAAATNAIRGTRTFKIKATSQKVDSLSCCPKLRWGHQTLGTSKDAEDSSA
KLCDQIHQRPRSTRSRQGSCNDYDQSSSTRSRLVNPAGKLPWLMLSKHEDGYRYIPQLGD
EVVYLRQGHQEYLKLVKNSEEGPWGPWESIKENIEVAEICKVESLDYASLPGSGESCCKI
KLRFVDPSSAILGKALKLTLPEIDFNDFIVEKTWYDASIRRNWTTGEECAVWWRDSISDE
GGTWWVGRIVRCQAKSHEFPDSPWLRYEVRYENDDETHLHCPWELREPSIVDDPSSCEQP
HIDSESKEELLRIFSKLQQKDSQTIQQLNQAVQKADFCNSFPVQLYPELIQSRLENDYYR
SLEAVKHDIMVMMSNAQHYFKRNELQARIKHISKRFKKKLSKL
NT seq 4992 nt   +upstreamnt  +downstreamnt
atggatcctcggaagtgtactttgtctggtggtgcaacttctcttgctatggcacctcca
agcattttgaataggttaaatgagaaggctcagtttgagaaagaagagagggatgcaggt
catgttgtcgaggctggagtcgatatagacattagagaggtttattttttgattatgcat
tttctgtctcttgggccatgccagaggactttcgaacagtttgggaatgatcttctggaa
catcagcttctacctagaaggtttcatgcttggttttcaaggagcagaataggaagtgac
aatagtaatgaggatgctacctctttcccattgagttacaacaacttggttgaaaggtat
cctcatatagagagagatcacttggtaaagcttctaaggcaactgctactgagtatagcc
actcctttacatggcaaggttggaagaagtactctgaatgcagctgatgtccctacatta
ctgggaactggttccttctcgcttctggatagtgataggaataaggaaaataagagagtt
aagcccctgccagctcacctgcgttggccttacatgcaggctgatcaaattcatgggctt
agtttaagggaaattggaggaggtttcacaaagcatcatcgagctccatccattcgctct
gcgtgttatgcgattgctaaaccatcaactatggtgcagaagatgaacaacaaaaagaag
ctacgggggcaccgtaatgctgtctactgtgccatttttgatcggtccgggagatatgtt
atcacgggtgcagatgatcggcttgtgaagatatggtcaatggaaactgcactttgcttg
gctagctgtcgtggacatgaaggagacattactgacttggctgtaagttcgaacaatgct
ttggtggcatctgcttcaaatgacttttccattcgagtttggcgtttgccagatggattt
ccaatttcagttcttcaggggcatactggggctgtgactgctattgcttttagtcccagg
cttagtgctgtttaccaacttctatcgtcatcagatgatgggacttgtcgaatctgggat
gctaggtcctcccaatgcccgctgcgaatatacatgccaaaaccttcagagacttcaact
gggaagggcaatgcttttgcaatcactggatcctcctcgagcaatggtccacagagccat
caaatactttgttgtgcttacaatgccaatgggactgtttttgtcactggtagctctgac
acttttgcaagggtctggaatgctttaaaatctaatacagataactcagaacaaccaata
catgagatggatgtactggcgggccacgagaatgacgtgaattatgtccaattcagtggt
tgtgtcattccttcaaagtcttcattttctgactcgggcaaggaggagactaatgggaag
ttcaaaaattcctggttttgtcacaacaacatagttacctgctctcgtgatggcagtgcc
attatatgggttccaagatcacacaaattccatgggaaagttggacgttggacacgtgca
tatcatctaaaagttccacctcccccactgcctcctcagcctcctcgaggaggcccacgt
caaagatttcttcccacccctcgtggtgttaacatgattgtgtggagcctggataaccgc
tttgtgcttgcagctatcatggattgcagaatttgtgtttggaatgctgttgatggtagc
ttagtacattctttaaccggtcacactgcatcgtcttatgttttggatgttcatcccttc
aatcctcgaattgctatgagtgctgggtatgatgggcaaacaatagtttgggatatatgg
gagggcgtgcctattaagatatacgaacttggacatgtaaagttggttgatgggaagttt
tcggcggatggtacatcaatagtactttcagatgacgttggccaaatatatttaataaac
acaggtgaaggcgagtctcaaaacgatgctgaatatgatcagttcttccttggggattat
cgcccccttgcacgggatgagtttggatatcttattgatcaggagacacaactttccact
taccgaaggaatcttcaagatcctctatgtgattcaagtatgataccataccccgaacct
tatcagagtacataccagcaacgaagacttggtgctctgggcatggaatggcgtccgtca
tccatgaaattttctgttggtgtggatatcaatacaggccaagaatatatgatgcctcct
ttgccagatttagaaagaatgattgaaccactaccagattttattgatgccatgttatgg
gaaccagaaaatgaggttgtaagtgaagatactgattcagagtataatgttactgatgaa
aattccagtgaaggggagaaaggaaatattagcaccagttcttctagtgatccagactgt
agcgaagaagacagtgaagctggatgcagtcacaaggatggtcttcgtcgatcaaggaga
aaaagaccaagggttgagtcttctgagaggcgtgtcaagaaaaggagagtgggtgagcat
gatcgcgttatatctgggattaaaagaactaaaaattcaaaaggtggccagaaagtttca
aagaggaagtcttctaaagcaaagacattgagaccccagcgagtagcagcacgcaatgct
cgaactgtgttttctcagaaccctggtacatctacagaaggagaagaagatgactgggaa
gatgattcatcaaatagtgagtctcttcagcaagatttccacactcaaagcgatgatgga
gacttccagataatgcaacaaaaacatactaaagaagaaccatctcaacatgagtttggc
aatatagcgaagccacgtgtagtttgttcgtctcagtcaaacgtcagaagcatgccgaaa
ttggtttttaagattaagaagcaagagactccaaaggatgtaaaactcaaagataataat
caggctgatttggtgtctccatcttctagatatcaagatgtcactccagataacaggatt
actaacagctctgtggatccagattcctcttcggtggatgtggttcagctaaagttttca
agaaatctcttagccaatgatttgacagatactggggaaaccgtaaagacagataattct
ttggaagcatctgcaagttaccaggatagcagagtcatggaagcagctactgggtcgctt
gctagttttaatgtccatatagaagagatgaataatgtccatcggtatggtaatcctgat
aataattgtgaacaattttgtaatcattcaaaaatgaagggaaaggaaaattatgaaggt
gtcttgccttgcagggatgaggaacgtactggaacacgtgcatttgaggatctggatggt
ctcaaaagtagagagctttctcatactgacgaggcccttgtatcttcatcatttgattcc
tcagctttgggcgagcacaaacaaaagataattgtgtgttctccggagatagaggacttt
gctagaagaaagcactctggtgattatgcgtctcttaaatttcctgcacaaaacttcaca
agttctagagatacaatccccaacgattcttcaagcatggatccgattccaaattcaaat
tttggggtacggaaagtgggtggaggtgctggcagatcaacttctttgaagtttgtttgc
aagcacaggactaattcagaaggttctggtggtaatgttgaagattatgcaacaaatatc
aacgaccatcatgattcaggaatggatctccccgcagctgcaaccaatgcaatacgcgga
acaagaacctttaagatcaaagcaacttcacagaaggtggactctctgagctgttgccct
aagttgaggtggggccatcaaacattggggacatcaaaggatgcagaagactcctctgcc
aaattgtgtgaccagattcatcaaagaccaaggtctacgagaagtcgtcagggttcatgt
aatgactatgaccaaagttcttcaacccgaagcaggttagttaaccccgctggaaagttg
ccatggttgatgttgtcaaaacatgaggatggttaccgttatattcctcagctaggtgat
gaagttgtatacctgagacagggccatcaagagtatctaaaactagtcaagaattcagag
gagggtccttggggtccttgggaatcaattaaggaaaacattgaagttgcggaaatttgc
aaggttgaaagccttgattatgcttcgctgcctggttcaggggagagttgctgtaaaatc
aaacttagatttgtagacccttcttctgctatcctcggtaaagcattgaagttgactttg
cctgaaattgattttaatgatttcattgttgagaaaacatggtatgatgcttctattaga
agaaactggaccactggggaggaatgcgcagtttggtggagggattcaatttcagatgaa
ggtgggacttggtgggtaggtcgaattgttcggtgccaggccaagtcacatgagtttccc
gatagcccttggttaagatatgaggttcggtatgagaatgatgatgaaacccatttgcat
tgtccttgggaattgcgtgaaccgtccatagtagatgatccatcctcatgtgaacagccc
catattgattctgaaagcaaagaggagcttctgcgtattttttctaaattacaacagaag
gactcgcaaacaatccaacaattgaatcaagctgttcaaaaggcggatttctgcaacagc
tttcctgtgcaattgtaccctgaactaatccagtcgaggttagagaacgactattataga
agcttggaagctgtgaagcatgatataatggttatgatgtcaaatgcccagcattacttc
aagagaaatgaattgcaagcccggattaagcacatctcgaaaaggtttaagaagaaactg
tccaagttgtag

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