Pyrus communis (pear): 137715142
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Entry
137715142 CDS
T10779
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137715142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137715142
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137715142
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
137715142
NCBI-ProteinID:
XP_068310479
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Position
14:complement(24095716..24099455)
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AA seq
584 aa
AA seq
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MPKRANSFPEEVLEYVFSFIQTDQDRNSISTVCKSWYEIERWCRRRIFIGNCYAVSPRML
IRRFPDVRSIELKGKPHFADFNLVPEGWGGYVYPWIAAMASAYPWLEEIKLKRMVVTDET
LELIAKSFKNMKLLVLSSCEGFSTDGLAAIAANCRNLRELDLHESDVEDLSGHWLSHFPD
TYTSLVSLNIACLGSELSFSALERLVARCPNLRSLRLNRSVPLDRLANLLRLAPRLTDLG
TGAYSAEWRPDVFAILSRAISGCKELKSLSGFWDVVPSYLPAIYSICPGLTSLNLSYATI
QSPALVKLVSQCPNLQRLWVLDYIEDVGLDALAESCKDLRELRVFPSDPFVVEPNVSLTE
QGLISVSEGCPKLHSVLYFCRQMSNDALITIARNQPNFTCFRLCIIQPKIPDYLTLQPFD
VGFGAIVENCKNLRRLSVSGLLTDQAFDYIGTYGKKLEMLSIAFAGDSDLGLHHILSGCD
NLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQRLPRLNVEVIDER
GHPESRPENSPVEKLYIYRSVAGPRFDMPGFVWTMDEDSALRVT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagggcgaactcgtttcccgaggaggttctggagtacgtgttctcgttcata
cagactgaccaggaccggaactcgatctcgacggtgtgcaagtcgtggtacgagatcgaa
cggtggtgcaggcggaggattttcatcgggaactgctacgccgtcagccctaggatgctg
atcaggcggttcccggacgttagatccattgagctcaaaggaaagcctcacttcgccgac
ttcaatctggtcccagaaggctggggtgggtacgtgtacccttggatcgccgccatggcc
agcgcctacccttggcttgaagagatcaagctcaagaggatggtcgtcaccgacgagacc
ttggagctgattgccaagtccttcaagaatatgaagctcctcgtgctttcgtcctgtgag
ggattcagtactgacggactcgccgccattgctgccaattgcaggaatctacgggagctg
gacttgcatgagagcgatgtggaggacctgagtgggcattggctcagccattttcctgat
acgtacacgtcacttgtgtcccttaacattgcttgcttggggtctgagttgagtttctct
gccctggagcgcctggtggctaggtgtcccaacctgaggagtctccggctcaatcgttcc
gtgcctcttgacaggctagccaatctacttcgcctggcacctaggctgactgatttaggc
acaggggcctactcagctgagtggcggcctgatgtctttgcaatcctatcacgtgccatc
tcaggatgcaaggaactcaagagcctatctggattttgggatgtggtaccatcatatctt
ccagctatttattcgatctgccctgggctaacatcactaaatttgagttatgccacaatt
caaagcccggctcttgtaaagcttgttagccaatgcccgaatctgcagcgcctctgggta
ttggattacattgaagatgttggccttgatgccctggcggaatcttgcaaggatctacga
gagttaagggtgtttccctcagatccatttgtggtggaaccaaatgtgtccttgacagag
cagggcctcatatctgtttctgagggctgtccaaagctccactcagttctgtacttctgc
cggcaaatgtccaatgatgcattaatcaccattgctaggaaccagcctaactttacatgt
tttcgtctttgtataattcagcccaaaattcccgactacctgacccttcagccctttgat
gtgggttttggggccattgttgagaactgcaagaatctccggcgattgtccgtctctggt
ctactaactgatcaagcatttgattatatcggaacctatggtaaaaagttggagatgctg
tctatagcctttgctggagatagtgacttggggcttcatcatatattgtctgggtgcgat
aatcttcggaaattggagatcagggactgtccttttggtgacaaggctcttttggccaat
gctgcaaagctggagacaatgcgatccctttggatgtcttcatgctcggtgagttatgga
gcatgtaagctacttggccagaggttgccgaggcttaatgttgaagttattgatgagagg
gggcacccagaatccaggccggagaactctcccgttgaaaagctctacatctataggtcc
gttgcagggccaaggtttgacatgcctggttttgtttggaccatggatgaagattcggca
ttgagggttacttga
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