Pyrus communis (pear): 137715235
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Entry
137715235 CDS
T10779
Name
(RefSeq) THO complex subunit 4A-like isoform X1
KO
K12881
THO complex subunit 4
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
pcox03015
mRNA surveillance pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137715235
09122 Translation
03013 Nucleocytoplasmic transport
137715235
03015 mRNA surveillance pathway
137715235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137715235
03041 Spliceosome [BR:
pcox03041
]
137715235
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137715235
TREX complex
137715235
Spliceosome [BR:
pcox03041
]
Complex C
Other components
EJC/TREX
137715235
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137715235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
137715235
NCBI-ProteinID:
XP_068310587
LinkDB
All DBs
Position
14:complement(6557897..6560329)
Genome browser
AA seq
269 aa
AA seq
DB search
MQDPLSMSLDDLIKTSKKSGSGNTRGRGGRGPSGPGPARRLPNRGANRAAPYVAAAKAPE
TAWQHDMYGDLGAAAYAAPAGRASAIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYG
VHYDRSGRSKGTADVVFSRRTDAAAAVKRYNNVQLDGKPMKIEIVGTNIGTPGAPPAFLP
APNLAFGNRNGPPMGSGQSRGGAFGRIRGGGGGSGGGGGGRGGRGPRRGGGGRGSGSGRG
RGEKDQKVSAEDLDAELEKYHAAAESMQE
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaccctctaagcatgtccctggacgacctcatcaagaccagcaagaaatccgga
tccggtaacacccgaggtcgcggcggccgggggccttccggacccggaccagcccgccgc
ttgcccaatcgaggcgccaatcgcgcggcaccgtacgtggctgcggccaaggcgccggag
actgcgtggcaacacgacatgtatggggatcttggggctgcggcgtacgcggctccagct
ggaagagcctcggctatcgaaaccggaaccaagctctacatctccaatctcgattatggc
gtttccaacgaggacattaaggaattgttttctgaggttggtgacctgaaacgttatgga
gtacattatgacagaagtgggagatcaaagggaacggcagacgtagttttctcacgacga
acggatgctgcggcggctgttaaaagatacaacaatgttcaacttgatgggaagccgatg
aagattgagattgtaggaacgaacattgggacacctggcgccccacctgcgttcctgcct
gctcctaatttagcttttggaaatcggaatggaccacccatgggcagtggacaaagtagg
ggtggtgcatttggacgtatacgtggcggtggaggtggcagtggtggtggtggtggtggc
cgcggtggccgtggtcctagaaggggcggtggtggacgtggaagtggaagtggaagaggc
cgtggtgaaaaggaccaaaaggtttctgctgaagatcttgatgccgagctagagaagtac
catgcagcagcagaatcaatgcaagagtaa
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