Pyrus communis (pear): 137715732
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Entry
137715732 CDS
T10779
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137715732
04121 Ubiquitin system [BR:
pcox04121
]
137715732
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137715732
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137715732
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137715732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
zf-RING_16
Prok-RING_4
zf-HC5HC2H_2
Zn_ribbon_FGT1_2
Rad50_zn_hook
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
137715732
NCBI-ProteinID:
XP_068311176
LinkDB
All DBs
Position
14:5696298..5697531
Genome browser
AA seq
366 aa
AA seq
DB search
MAMPSPPPTTSYWCYRCTRFVRVFALDSALLCPHCETGFLEEIETMPQPLPQPNHLRRRF
PSSYRHEEERGQNPIPTSRRVRRASGDRSSLFNPVIVLRGTEADTESNTFELYYNDAAGS
GLRPLPPTMSELLMGSGFDRLLEQLSQIEINGLGRPENPPASKSAVESMPVIQIADSHVG
SDSHCAVCKEAFELGSEAREMPCKHIYHPDCILPWLSMRNSCPVCRHELPADQNNRNSDP
GLEEETMGLTIWRLPGGGFAVGRFSGGRRPGERELPVVYTEMDGGFNGNGAPRRVLWASR
SRGSESRGFRSAFRNIASFWGRLRSDSSSSRSGSESESGPGLTRSQSSSVFGRFVHRRRR
AWVLDD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccttcaccgccaccgacgacgtcgtattggtgttacagatgcactcgcttc
gtccgcgtgtttgctctggactccgccctcttgtgcccccactgcgaaaccggcttcctc
gaggagatcgagacgatgccacagccgctaccgcagccgaaccatctccgccgtagattc
ccgtcctcctaccgccacgaggaagaacggggccaaaacccgattccgacctcccgccgg
gtacgacgggcctccggcgaccggtcttctctattcaacccggtcatcgtcttacgtggc
accgaggccgataccgagtccaacacattcgaactctactataatgacgccgcggggtcg
gggctacgaccacttccgcccaccatgtccgagcttttaatgggttcgggcttcgaccgc
ttacttgaacagctctcccagattgaaatcaacggtttgggccgacctgaaaacccgcct
gcgtctaaatccgccgtggaatctatgcccgttattcaaatcgccgattcccacgtcggg
tcggactcgcactgcgccgtttgcaaagaagcgttcgaactcgggtcggaggcccgagaa
atgccgtgcaagcacatataccacccggattgtatcctcccctggctctcaatgcgtaac
tcgtgcccggtttgtcgacacgagctgcccgctgaccaaaacaaccgtaattcggatccg
ggtctcgaggaagagacgatgggtttgactatctggagattacccggcggaggatttgcc
gtggggagattctccggcggcagaagacccggcgagagggaattaccggttgtgtatacg
gaaatggacggcggtttcaatggaaacggggctccaagaagggtattatgggcatcgagg
agtagagggagcgaaagtcgcgggtttcggagtgcttttcgtaatatagcttcgttctgg
gggcgtttacgttccgattcatcatcttcgaggtccgggtcggaatctgaatccgggccg
ggtttgactagaagtcagtcaagttcggtgtttgggcggttcgtacaccgtcgtcggagg
gcgtgggtgttggatgattag
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