Pyrus communis (pear): 137715880
Help
Entry
137715880 CDS
T10779
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137715880
Transcription machinery [BR:
pcox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137715880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
137715880
NCBI-ProteinID:
XP_068311341
LinkDB
All DBs
Position
1:5352929..5356392
Genome browser
AA seq
556 aa
AA seq
DB search
MGFGFRLNLLKSGFPLHHSHWQAAGSPSKLSFTSVRGREGSFNSARLLFLSIISEEGGIS
GKDTLKVYSCSSASPQILEDGVSEMEQISFRSSSSNTTGNNQMPVADGNFRPVNALESCS
AAHFSLLLKNLDALEETFANSDVLKLEKEILLQLGRLGALQLFDACLSRTLTSSSFFDLS
DIPTVQIEGHKMDKKVDNDRGKIIVRSGKKKERRSRKRALDNVRVSSDSLPPKSTWEGSK
HPTASSAKRASKYRKCRLTIAKNEGEMSTGVKVIANLERIKATLEKETGTVATLSCWAEA
AGVREKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRGLGVAMDDLLQAGNQGLLQGAE
RYDHSRGYRFSTYVRYWIKKSMSRLVARHAREIQIPFTLSKAINQIQKACKATYNSHMRY
PDDDEIAKITGLSLVRIRSASTCLRVVGSVNDKMWDNSPGTFMEFTPDTSIKSPEETVTR
QHMKKDIHDLLKCLASKERQVLVLRYGLNNYDPKSLEEIGKLFDVSKEWIRKIEKKALTK
LKDDETHRSLSHYLKN
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggttttggttttaggctcaacctcctcaagtctggctttccacttcatcactctcac
tggcaagctgctggttctccttccaagctctcttttacttctgttagaggcagggagggc
tctttcaactcggcaaggctgttattcctgtccattatttctgaggaaggcgggatttcc
ggtaaagatactctgaaggtgtactcttgttcatctgcttcaccgcagatcttagaggat
ggcgtctctgaaatggaacagataagctttaggagtagttcgtccaacacgactgggaat
aaccagatgcctgttgcagacggaaactttagacctgttaatgccttagaatcttgcagt
gcagctcattttagtttgttactgaaaaatcttgatgctctggaggagacttttgctaat
tcagatgtgttaaagttggaaaaagagatacttttacaattaggaaggcttggagctcta
cagttatttgatgcctgtctgtcaagaactcttacatcctcaagcttttttgatttgtct
gacatacctactgtacagattgaagggcataagatggataagaaagtagataacgataga
ggcaagattattgtacgttctgggaaaaagaaggaaagaagatcaagaaaaagagcatta
gataatgtcagagtttcttctgactcattgcctcctaaatcaacttgggaaggttccaaa
catcctacagcttcatcagcgaaaagagcatcaaagtatcgaaagtgtagacttacaata
gctaaaaatgagggagaaatgtcaaccggggttaaggtgatcgccaatttggagagaatt
aaagcaactttggaaaaggaaactggcacagtagctaccttaagttgttgggcggaagca
gcaggagttcgcgagaaggtgctgttacaaaaattgcattttggttggtactgccaggat
gagcttataaggagcactcgttctttagttctataccttgctagaagctatagagggcta
ggagtagccatggatgatttactgcaggctggaaaccagggtctcctgcaaggtgcagaa
aggtatgatcactcgaggggttaccgattctcaacctatgtccgatactggataaagaaa
tcaatgtcaagattggtggcacggcatgctagggaaatccaaattcctttcacgctaagc
aaggcaataaatcagatacagaaagcttgcaaagccacttacaacagccacatgagatac
ccagacgatgatgaaatcgcaaagattacaggtctttcgttggtgagaatcagatcagct
agcacatgtctgagagttgtgggttcggtaaatgacaagatgtgggacaactctcctggg
acttttatggaatttacaccggacacatcaataaaaagccctgaagaaactgtcacgaga
cagcacatgaaaaaagacatccatgatctgctgaaatgcttggcctcgaaggagaggcaa
gtgttggtgctgcgatatgggttaaacaactacgaccccaagtcacttgaggagattgga
aagcttttcgatgtgagcaaggagtggatacggaagatagaaaagaaagctctcacaaag
ctaaaggacgatgaaacacacagaagtttaagccattacttgaaaaactag
DBGET
integrated database retrieval system