Pyrus communis (pear): 137716282
Help
Entry
137716282 CDS
T10779
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
Enzymes [BR:
pcox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
137716282
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137716282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137716282
NCBI-ProteinID:
XP_068311810
LinkDB
All DBs
Position
14:complement(1722023..1726432)
Genome browser
AA seq
723 aa
AA seq
DB search
MNTHRPASALSRAISRAISHSSSSSSLQQQSSTFPLKNVTKSNFEPALADLRRHVATADF
VAIDLEMTGISSAPWRDSLEFDRADVCYLKVKDSAEKFAVLQFGVCPFRWDSSKRSFIAH
PHNFYIFPRQELPLAGPPYEFLCQTTSIDFLAKYQFDFNVCIHEGISYLSREQESEALRR
LSLAYDDELLARCSNLKEPMHMPVVKMADTLFAERMKNSFTEWRDGLLRSSKGGFQFQGD
SNDSQQLQTIFFKLRPALSLRGFTSHQLKLIQMVITRHFQDLFYVRINGEKSCQQQLVVR
TESKDDRELLLKEVKDEHRREAEVKVQAAVGFRHVIDLLSSEQKLIVGHNCFLDIAHVYS
KFLGPLPSTAEEFVSTVNKYFPHVIDTKVLLNTDNVLQQRMKKSRTSLSSAFALLCPQIA
LGKKSTDSEVQMCVKVEVQVDDLRSSNWNSGAKHEAGYDAFMTGCVFAQTCSHLGIDFQA
CSSSEKLAHNEKLQKQINHLYLSWSNGDIIDLTTGKKNAMSSGSNNHKKRYSQIMSENVA
LIWGFPSKLKARDIRECISKVFGSTSVTSVFHLDETAVFVQFSKEKFVSEFLALKETLER
SDGPVSVLHPLAGLLEGGSTRAANYETYKEICSSPSAKGFLADQAEAVGIKWKTKLVESK
EASETLKRESLDENSEVNPASKTEKLRRSTTDTAENDPFCGRRAQYKIIDTLIASEGDQM
RTN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcaccgcccggcgagtgcactgtcacgtgctatatcacgtgccatatcccac
tcctcctcctcctcgtcattacaacagcaatcctcgacctttcctctgaaaaacgtgacc
aaatcgaacttcgagccggctctggccgacctgcgccgccatgtcgccaccgcagacttc
gtggccatcgatctcgagatgaccggaatctccagtgcgccatggcgcgactctctggag
ttcgaccgcgccgacgtttgctaccttaaggtcaaggactcggccgagaagttcgccgtg
cttcagtttggcgtttgccccttccgatgggactcctccaagcgctccttcattgctcat
ccgcacaatttctacatttttccgcgtcaagaacttccacttgcaggcccaccatatgag
tttctatgccagactacatcgatcgatttcttagctaaataccagtttgattttaatgtc
tgcatacatgaaggaatatcttatttatccagagagcaggaaagtgaggcgctgagacgt
ttgagtttggcatatgatgatgagttattggctagatgttcaaacttgaaggaaccaatg
cacatgccagtggtcaagatggctgacactctcttcgctgaacggatgaagaactcattc
actgaatggcgtgatggtttgttaagaagtagtaagggaggattccagtttcagggagac
tcaaatgactcccaacagttacaaaccattttcttcaagttgcgtccagctcttagtctg
aggggattcacttctcatcagcttaagttgattcaaatggtcattacaaggcatttccaa
gatctcttttatgttcggataaatggtgaaaagtcctgtcaacagcaactagttgtgcgg
acagagtccaaggatgacagagagttacttctgaaagaggtgaaggatgaacatcgtagg
gaagcagaggtgaaagttcaagctgcagttgggtttcgtcatgttattgaccttctttcc
tcagaacaaaagttgattgttggtcacaattgctttcttgatattgcccatgtatatagc
aaattcctcggccctcttccttcgactgctgaagaatttgtctctactgttaacaagtac
tttccacacgtcattgacaccaaagtactattaaacacggataatgtgctccaacaacgg
atgaagaaatcccgaacatcactttcgtcagcatttgccttgttatgcccacaaattgct
cttgggaagaaaagcactgattcggaagtccaaatgtgtgtcaaagtggaagttcaggtg
gatgatttgaggtcctccaactggaattctggagccaaacatgaagcgggatatgatgct
tttatgacaggctgcgtctttgctcagacatgcagtcatctcggaattgattttcaggcc
tgttcgtcatctgaaaagttggcccacaatgagaagctccagaagcagatcaaccatcta
tacctcagttggagtaatggagacattattgatttaaccactggtaagaagaatgcaatg
tcttcggggtctaataaccacaaaaagaggtactcgcagattatgtctgagaacgttgct
ttaatctggggattcccatcaaaactcaaggcacgagacatcagggagtgcatttcaaaa
gtctttggctcaacctctgttacgtctgtcttccacttggatgaaactgcggtattcgtt
cagtttagcaaggaaaaatttgtctctgaatttctggctttgaaggaaacattagagaga
agtgatggtccagtctcagttttgcaccccctcgcgggacttttggagggtggaagcacc
cgagctgctaattatgaaacttacaaggaaatctgcagttcacccagcgcaaagggcttt
ttagcggatcaggctgaggcagttggtattaaatggaaaactaaattggttgaatccaag
gaagcatcagagaccctaaaacgggagagcctcgatgaaaatagtgaagtgaatcctgct
tcaaagaccgaaaaattgagaagaagtaccacagacaccgcagaaaatgatccgttctgt
gggcgtcgcgcacaatacaagatcatagataccttaattgcttctgaaggcgatcaaatg
agaactaattag
DBGET
integrated database retrieval system
