Pyrus communis (pear): 137716421
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Entry
137716421 CDS
T10779
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137716421
03036 Chromosome and associated proteins [BR:
pcox03036
]
137716421
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137716421
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
137716421
SLIK complex
137716421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
COG4_m
SWI2_SNF2
DpnD_N
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
137716421
NCBI-ProteinID:
XP_068311974
LinkDB
All DBs
Position
14:complement(14365030..14385392)
Genome browser
AA seq
1741 aa
AA seq
DB search
MAFFRNYSNNTVSRSVLEEKTLGQSVERIHSSTGNEDMDVNSYEKECDINMDVQYQSEGE
HEDASRLHNEAAEDEVIGTKVSNLPTSGRRTAVAGKWGSTFWKDCQPMRSQGGSDSGQET
KSGLDYRNAVGSEDNSSDVREDGIDFEDEGKPKLSKGQRGHSDIPADEMLSDEYYEQDGE
EQNELMRYRGFHHSVGSNSRPQSKPNSVSDRAHYRTSRNDIEDFEDGDDANEDLDAADAD
YEEEEDEDDPDDADFEPDSGVGSGRTAQKDNNWNGEDSDDDNDSDDELDVSDEDDSYYGK
KPKSRYRGNAKSTRERKSYHSSSRQRRGKSSFDDDESSAEYSESDSDEDFKSIKRKGVHT
RKGNGRRNVTGQNGEVRTSTRSVRKVSYVESDGSDEVEEGKKKKSQKEEIEEEDGDYIEK
VLWHQPKGMAEDALRNNKSTDPVLLSHLFDSEPDWNHMEFLIKWKGQSHLHCQWKSISEL
QNLSGFKKVLNYTKKVMEDARYRNTISREEIEVHDVSKEMDLDLIKQNSQVERIIADRIR
QDSSGDVGPEFLVKWQGLSYAEATWEKDVDIVFAQDAIDEFKVREAAMAVQGKMVDLQRK
RSKGSLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSML
GFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFNNDK
IVGRPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNK
LLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEIELANLHMELRPHIL
RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVEL
KKCCNHPFLFESADYGYGGDSSSKDGSKLERTILSSGKLVILDKLLMKLHETKHRVLIFS
QMVRMLDILAEYMSIRGFQFQRLDGSTKADLRHQAMEHFNAPGSEDFCFLLSTRAGGLGI
NLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMV
LDHLVIQKLNAEGRLEKKESKKGTLFDKNELSSILRFGAEELFKEEKNDEESKKRLLSMD
IDEILERAEKVEEKETAEEGNELLSAFKVANFGTAEDDGSFWSRWIKPEAISQAEEALAP
RATRNTKSYAEADQPDRSNKRKKKESEPQERVQKRRKADYTVTSVPMIDGASAQVRGWSS
GNLSKRDALRFSRAVMKFGNESQIALIVEEVGGAVAAASTDAQVELFKALIDGCTEAVEV
GSLDPKGPLLDFYGVPVKAGDLLNRVRELQHLAKRISRYDDPVAQFRVLMYLKPSNWSKG
CGWNQIDDARLLIGIYYHGFGNWEKIRLDERLGLTKKIAPVELQHHETFLPRAPNLRDRA
NALLEMDIAALSGKNANVKVGRKASKEREATRNVSLARSGPKKGKTSSSRANFPTNKDRP
LKPQKVEPLVKEEGEMSDDDEVYEKFKEEKWMEWCEEMMKDETKTLNRLQRLQTISANLP
KEKVLSKIRSYLQLLGRTIDQIVLENEEEPYGQDRMSMRLWNYVSTFSNLSGERLHQIYS
KLKQHQDVEAGPSHMNGSASGPFGRDNDPSPFSFHLDRQRGPDTAKFEAWKRRRRGEADS
NIQVQAPSQRNMNNGTRLTDPSSLGILGAGPSENKRTVNERPYRTRQTGLPTKQGFTSGI
K
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttttttaggaactattctaacaacacagtttcacgaagtgtcctggaagaaaag
accctaggacaaagtgttgaaagaattcatagctccacagggaatgaagatatggatgta
aattcttatgaaaaggaatgtgatatcaacatggatgttcagtatcaaagtgagggcgaa
catgaagatgctagtaggttgcacaatgaggcagcagaagatgaggttattggtacaaaa
gtttccaatttgcccacttctgggaggagaacagctgtggctggaaagtggggttcaacc
ttctggaaggactgtcaacctatgcgctcacagggtgggtctgattctggtcaggaaact
aaaagtgggttggactacagaaatgctgttggatctgaagataattcttcggatgtcagg
gaagatggaatagattttgaagatgagggcaagccgaaattaagcaagggacaacggggt
cattctgacatccctgcagatgaaatgttatctgatgaatattatgagcaggatggggaa
gaacagaatgaattgatgcgctatagagggtttcatcactctgttgggtcaaattctagg
ccacaatcaaagcctaattcagtcagcgaccgtgcacactatagaacttctagaaatgat
attgaagattttgaagatggtgatgatgccaacgaagatcttgatgctgctgatgctgat
tatgaagaagaagaagatgaagatgatcctgatgatgccgattttgaacctgattctggt
gttgggagtggtcgcactgcacagaaggataataattggaatggtgaagattctgatgat
gataatgatagtgatgatgagcttgatgtttcagatgaagatgattcttattatggaaag
aaacctaagagtaggtatcgtggtaatgctaaatctacaagggaacgcaaatcatatcat
tcgtctagtcggcaaagaagagggaagtcatcgtttgatgatgatgagtcctcagcagag
tactctgaaagtgacagtgacgaggattttaaaagtattaaaaggaaaggtgtacatacc
cgcaagggtaatggccgaagaaatgttactggacaaaatggtgaggtacgaacttctact
aggtctgttaggaaggtctcctatgttgaaagtgatggaagtgatgaagttgaagaagga
aagaaaaagaagtcccagaaggaggagattgaagaagaggatggtgactatattgaaaag
gtgctttggcatcagcctaagggcatggctgaagatgctctgaggaacaataaatcaacg
gatcctgtgctattaagtcacttgtttgattctgagccagattggaatcatatggagttc
ttgataaaatggaaagggcagtcccatttgcactgtcagtggaaatcaatttccgagcta
caaaatcttagtggttttaagaaggttttaaattacactaaaaaggtgatggaagatgcc
aggtacaggaacacaatttcacgtgaggagattgaggttcacgatgtgagcaaggaaatg
gacttagatctcatcaagcagaatagtcaggtggagagaataattgcagaccgcatcagg
caagatagctctggcgatgtgggtccagaatttctagtcaagtggcaaggattgtcttat
gctgaagcaacatgggagaaggatgtagatattgtgtttgcacaagatgctattgatgag
ttcaaggttcgtgaagctgcaatggctgtacaagggaaaatggtggatctccagcgcaag
aggagcaaaggaagtctaaggaagctcgaggaacagcctgaatggttgaagggaggaaag
cttcgtgattatcagcttgagggtttgaattttcttgttaatagttggaggaatgatacc
aatgtcattttagctgatgaaatgggtcttggtaaaacagttcaatcagtttcaatgctt
ggttttttacagaacgctcaacagatccacgggccatttcttgttgttgtaccattatcc
acgttgtctaactgggccaaagaatttaggaagtggctccctgatatgaatattattgtg
tatgttggtactcgtgcaagccgagaggtttgtcagcagtatgaatttaataatgataaa
atagttggccggcctattaaattcaatgcactattgacgacgtatgaggtggttttaaag
gataaggctgttctttccaagatcaagtggaattatctaatggttgatgaagctcataga
ttaaagaacagtgaggcacagttgtacacaaccctcttggaatttagcacaaagaacaag
ttgcttataactggtactcccttgcagaacagcgtagaggagttatgggctctgcttcac
ttccttgaccctgataaattcaagaataaagatgattttgttcagaattacaaaaatctc
agttccttcaatgagattgagcttgctaatctgcatatggaattgaggcctcacattctt
cgaagagttatcaaggatgtggaaaagtctttacctcctaaaattgaacggattcttagg
gttgaaatgtctcctcttcagaaacagtattataagtggattttggaacgcaactttcat
aacttgaacaaaggagttcgtgggaatcaggtttcgttgttgaatattgtggtagaattg
aagaaatgttgtaatcatccctttctgtttgaaagtgctgactatggttatggtggggac
tcaagtagtaaagatggcagtaaattggagaggactattttaagcagcggaaagttggtt
atactcgataagcttcttatgaaattgcatgaaacaaagcaccgtgttctcatattttcc
cagatggtaagaatgttggacatactggcggagtatatgtcaattagaggttttcaattt
cagcggcttgatggaagtacgaaggccgatttacgccaccaagcaatggaacattttaat
gcgcctggtagtgaagacttttgcttcctcctttcaactcgagcaggtggccttggtatc
aaccttgccacagcagatacggttataatattcgactcagattggaatccacaaaacgac
ctgcaggcaatgagcagagctcacagaataggtcaacaagaagttgttaacatatataga
tttgtcacaagcaaaagtgttgaggaagatatcctggagagagctaagaaaaagatggtg
cttgaccatttggtgattcaaaaattaaatgcagagggtaggttggagaagaaagaatct
aagaaagggactttatttgacaaaaatgagctgtcttctattctacgatttggggctgag
gaacttttcaaggaagaaaaaaatgatgaagaaagcaagaaaagactcttaagtatggat
attgatgagattcttgaaagagcagaaaaggttgaagagaaggaaactgcagaggaaggg
aatgaattgttgagtgcttttaaggttgcaaattttggtactgctgaagatgatggtagt
ttttggagtcgttggataaagcctgaagcaatatcccaagccgaagaagctcttgctcct
cgtgccactaggaatactaagagctatgcagaagctgatcagcctgatagaagtaataaa
agaaaaaagaaagaatctgagcctcaggaaagagtccagaaaagacggaaagcagattat
acagtcacctcagtgccaatgattgacggagcatctgctcaagttaggggatggtcttct
gggaacttatctaagagagacgcattgcgattttctcgtgctgttatgaaatttgggaat
gagagccaaattgcgttgatagttgaggaggtcggtggtgcagttgcagcagcttcaact
gatgcacaggttgagcttttcaaggcattgattgatggctgcacagaagcagtggaagtg
gggagtctggacccgaaggggccattgctggatttttatggtgtccctgtcaaagctggt
gatctgctcaaccgtgttcgtgaacttcaacacctggcaaaacgcattagtcgatatgac
gatcctgttgctcagtttcgtgtcttgatgtacctcaaaccttcaaattggtcgaaaggt
tgtggctggaatcaaattgatgatgcaagattgctcattggaatatactaccacggcttt
ggaaattgggaaaagatacgtttagatgaaaggcttggccttacaaagaaaattgctcca
gtggaacttcaacaccatgaaacatttttaccccgtgctccaaatttgagagatcgagcc
aacgctcttttggaaatggatattgcagctcttagtggaaagaatgcaaatgttaaagtg
ggtcgtaaggcttcaaaggagagggaagctactcgcaatgtttctttagctcgcagtggg
ccaaagaaaggaaaaaccagttcttctagagctaattttccaacgaacaaggacagacca
ctgaaaccccagaaagttgaacctttagtgaaagaggagggtgaaatgtcagacgatgat
gaagtgtatgagaagtttaaggaggagaaatggatggaatggtgtgaagagatgatgaag
gatgaaactaaaaccttaaatcgtcttcaacggttgcagacgattagtgccaatctcccg
aaggaaaaggtgctttccaagattcgaagttatttacagcttcttggacgaacgatagat
caaattgttttagaaaatgaggaggaaccgtatggacaagataggatgagcatgcgcttg
tggaactatgtttctaccttttcaaatctgtccggggagagacttcatcaaatatactca
aaacttaaacagcaccaggatgtggaggctggcccttcccacatgaatggctctgcttct
ggtccctttggcagagacaatgacccttctcccttctccttccatttggacaggcaaaga
ggtcctgatacagcgaagtttgaagcatggaaacgaaggaggagaggggaagctgatagc
aatatccaagttcaggccccatctcaaagaaatatgaataatggtacccggttaactgat
ccaagctcattagggattcttggtgcaggaccatcagaaaataaacgcactgtgaatgaa
aggccttataggacacggcagacaggtttaccaacaaaacaaggtttcacatcaggtatt
aagtag
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integrated database retrieval system
