Pyrus communis (pear): 137716757
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Entry
137716757 CDS
T10779
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pcox Pyrus communis (pear)
Pathway
pcox03030
DNA replication
pcox03410
Base excision repair
pcox03420
Nucleotide excision repair
pcox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137716757
03410 Base excision repair
137716757
03420 Nucleotide excision repair
137716757
03430 Mismatch repair
137716757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcox03032
]
137716757
03036 Chromosome and associated proteins [BR:
pcox03036
]
137716757
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137716757
DNA replication proteins [BR:
pcox03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137716757
DNA Replication Termination Factors
ELG1-RFC complex
137716757
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137716757
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137716757
Check point factors
HRAD17(Rad24)-RFC complex
137716757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_22
AAA_11
AAA_30
AAA_assoc_2
AAA_5
AAA_24
AAA_14
DUF815
AAA_7
RuvB_N
ATPase_2
AAA_19
AAA_2
ResIII
bpMoxR
DNAX_ATPase_lid
TniB
SLFN-g3_helicase
nSTAND3
TK
AAA_3
AAA_25
AAA_28
MCM
Mg_chelatase
TIP49
ABC_tran
Motif
Other DBs
NCBI-GeneID:
137716757
NCBI-ProteinID:
XP_068312239
LinkDB
All DBs
Position
15:complement(15488189..15491635)
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AA seq
366 aa
AA seq
DB search
MAEPITLMDIDDDDNLSVQPNNKGKNVVVSAAAPSNGKATPWVEKYRPHSLADVAAHRDI
VDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGINVV
RQQIQDFASTQSFSFGGDSAKSSVKMVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLIC
NHVNKIIPALQSRCTRFRFAPLEEFHVSERLKHVIEAEGLDVPASGLAAVVRLSNGDMRK
ALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAESFKRISDMKARKGL
ALIDIVREVTMFVFKIMMPADVRVKLINDLADIEYRLTFGCNDKLQLGSLIATFTKARSA
LAAAAK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccaatcactctcatggacatcgacgacgatgacaacctatctgtacaaccc
aacaacaaaggcaaaaacgtcgtcgtctccgccgccgccccttccaacggcaaagccacg
ccgtgggtcgagaagtaccgccctcattccctcgcagacgtcgctgctcaccgcgacatt
gtcgacaccattgataggcttactagtgagaacagattgccgcacctcctactatatggc
cctcctggtactggcaaaacttcaaccattcttgctgtggcacgcaagctctatggagcg
cagtaccacaatatgattctggagttgaatgcatccgatgacagggggatcaatgttgtg
cgacaacagattcaagattttgctagcacgcagagtttctcgtttgggggtgatagtgca
aagtcatctgtaaaaatggtattgctggatgaggcggatgctatgacaaaggatgctcaa
tttgctttgcgaagggtgattgagaaatacacaaagaatactaggttttcactaatttgt
aatcatgtcaacaagatcattccagcattacaatcacgatgtactcgtttccgatttgct
ccacttgaggagtttcatgtctcagagagactcaaacatgttatagaagctgaagggctt
gatgtgcctgcgagtggcttagcggcagttgtacggcttagcaatggtgacatgagaaag
gctctgaacattttgcagtcaactcatatggcttcacagcagataactgaagaagcggta
tatctttgcacaggaaatccattgcccaaagatattgagcaaatatcttactggcttttg
aacgaatcatttgctgagagtttcaaacgaatatctgacatgaaagcaagaaaagggttg
gctttgatagatattgtaagagaagtgaccatgttcgtttttaagattatgatgcccgca
gatgttcgagttaaattgattaatgatttagctgacatagagtacaggttgacgtttggg
tgcaatgataagttgcaactcggatcactgatagccactttcacaaaagctcgatctgca
cttgctgctgctgcgaagtag
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integrated database retrieval system
