Pyrus communis (pear): 137717232
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Entry
137717232 CDS
T10779
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137717232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137717232
Enzymes [BR:
pcox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
137717232
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
137717232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
137717232
NCBI-ProteinID:
XP_068312623
LinkDB
All DBs
Position
15:7566319..7572586
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AA seq
683 aa
AA seq
DB search
MAGSEDPVASSPAEQPPKHYGTTKPIFLSGPTEYDLQRNVELERYLIDSELYESKDEAAK
REEVLGRIDQIVKGWVKQLTSQRGYTDQMVEDTNAVIFTFGSYRLGVHGPGADIDTLCVG
PSYVNREEDFFITLHDILAELEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISFMVVP
EDLDISHGSVLYDVDEQTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSN
VTGFLGGVNWAILVARICQLYPNAIPSMLVSKFFRVYTQWRWPNPVILCSIEENELGFPT
WDPRRNPRDRLHHMPIITPAYPCMNSSYNVSVSTLRVMAEQFDHGNRICEEIELNKAQWS
ALFEPYLFFEAYKNYLQVDIVAADVDDLLTWKGWVESRFRQLTLKIERDTKGMLQCHPYP
KEYVDLSKPCPHCAFFMGLQRKEGVRGKEGQQFDIRGTVDEFREGINMYMFWKPGMDIYV
SHVRRKQLPPFVFPDGCKRPRLSRHVSQQEERTYEDSAGCSSGSAERHTRRKIDHKTEDV
RAIKLEKQTSVSSQLMESVAPESSTGGAPDTSFSNSIRLECLATGDAEKKSDSRLPVGQL
ERERGSVADMRTVDNVVHESNTTNECTSVHVPEFPKVRNEVKPSQEDYEVKPSEQLEKPL
SWKELVIPCAASISESKETCEMA
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttctgaggatccagtggcctcttccccggctgagcagccgccaaagcactac
ggcaccaccaagccaatcttcctttccggtcctaccgagtatgatcttcaacgaaatgtc
gaactcgaaaggtacttgattgattcggaactttatgagagcaaagacgaggctgcgaaa
agagaagaggttcttggccgcattgatcagattgtgaaaggctgggtgaagcagttgaca
agtcaaagaggctacacggatcagatggtggaggacacgaatgctgtcatttttactttt
gggtcttatcgtcttggggttcatgggccaggagctgacatagacactttgtgtgttggg
ccatcatatgtgaatcgagaggaagatttctttattacattgcatgatatccttgctgaa
ttggaagaggttactgaacttcaaccagttcctgatgctcatgtccccgtcatgaaattc
aagttccagggaatatcaatagatcttttgtatgcaagcatctcttttatggttgttcca
gaagatctagacatctcacatggatctgtgctatatgatgttgatgagcaaactgttcga
agtctgaatggctgcagggttgcagatcaaattcttaaacttgtccccaatgttgagcac
ttccggacgacactcagatgtttgaagttttgggctaaaagacgtggtgtttattcaaat
gttactggattccttggtggtgtaaattgggctatcttagttgctcggatatgccagctt
tatcccaatgcaattcctagcatgttggtttccaaatttttcagagtgtatactcagtgg
cgttggccaaatcctgtaattttatgttcaattgaagagaatgaactagggttccctaca
tgggaccctcgtagaaaccctcgggaccgccttcatcatatgccaataataactcctgca
tacccttgcatgaactctagttacaatgtctcagtaagtactctacgtgttatggcagag
cagttcgaccatggtaataggatatgtgaggagattgagctgaataaggcccagtggagt
gctctctttgaaccttatctcttctttgaggcgtacaaaaattatctacaagtcgacata
gttgcagcagatgttgatgacttgctgacgtggaagggatgggtggaatcccggtttaga
cagcttaccctgaagatagagcgagacacgaaagggatgctgcagtgccatccatatcct
aaggaatatgtcgatctatccaagccatgcccgcactgtgctttctttatgggtttgcag
aggaaagagggagtgagaggtaaagaaggtcagcaatttgatatacgtggaacagtcgat
gagttcagggaaggaataaacatgtacatgttctggaaacccgggatggatatatatgtt
tctcatgttcgccggaagcagcttcctccctttgttttccccgatgggtgtaagcggcct
cgattatcaaggcatgtaagtcagcaggaagaaagaacttatgaagattctgcaggttgt
agttctgggtctgcggaaagacataccaggaggaaaattgatcataaaacagaggatgtg
agggcaatcaaactcgagaagcagacgtctgttagttcacaattgatggagtctgtggcc
ccagaaagtagtacaggtggagcacctgataccagcttcagtaacagcattaggttagag
tgtctggcaactggagatgcagaaaagaaatctgatagtagattgcctgttggacagtta
gagagggaaaggggaagtgttgcagacatgagaacggttgataatgttgtgcacgaatcc
aatactacaaatgagtgcacatctgtgcatgttcctgaatttcccaaagtcagaaatgag
gtcaagccttcgcaagaggattatgaggtaaaaccatctgaacagttggagaaacctctt
tcctggaaggagctggtaattccatgtgcagcgtctatctcagagtccaaggaaacatgt
gagatggcctaa
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