KEGG   Pyrus communis (pear): 137717284
Entry
137717284         CDS       T10779                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137717284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcox03021]
    137717284
Enzymes [BR:pcox01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     137717284
Transcription machinery [BR:pcox03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     137717284
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 137717284
NCBI-ProteinID: XP_068312693
LinkDB
Position
15:complement(3202402..3210483)
AA seq 1203 aa
MGASSDAKGDIGMSSKGESFTNGVDMDIDDSDYDDEYDYSTSLQDLGEGFLKNFCKEAAT
SFFNEYGLISHQINSYNDFIQNGIQRVFSSFGEIIVEPGYDPSKKGDNEWRYALVKFGKV
TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCAKMKVNITVEVYNQRLVSSDKFKTGKER
FLDKEILSTDTRDITVGSVPVMVKSDLCWMRDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ
SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV
WFFALGVSSDKEVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD
VIKKTAFPPGESMEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN
KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS
TGAWCHPFKKMERMSGVVATVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV
CFLSTPDGENCGLVKNLATTTIVSTNILESLLPELSLCGMEKLVDDTSTSLQGKFKVFLN
GDWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL
NKIKALKGEKHPFKYFLNKGIIELIGAEEEEDCSTAWGIKYLFMEEKGKSAVKYTHCELD
MSFLLGLSCSIIPFANHDHARRVLYQAQKHSSQAIGFSTTNPNLRVDTLSHQLHYPQRSL
FQTMTSDCLGKPGHQLGKNRVLPKPELYNGQNAIVAVNVHLGFNQEDSIVMNRASLERGM
FRSEHIRSYKAEVDNKHSLEKRRKPDDCVNFGKMQSKFGRVDNLDEDGFPYVGANLQSGD
IIIGRCSESGADHSIKLKHTERGMVQKVVLSSNDDGKNFAVVSMRQVRSPCLGDKFSSMH
GQKGVLGFLESQENFPFTVQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSKKYA
TPFSTLSVDDIAEQLHRAGFSRCGKERVYNGGTGKMARSLIFMGPTFYQRLIHMSEDKVK
FRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQVYICQ
KCEHVANVIQRSVEGGRKIRGPYCRNCNSADDLVKANVPYGAKLLCQELFSMGISLKFET
RFS
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgggggcgtcatcggatgccaagggagatattggtatgagcagcaagggagaaagtttt
acaaatggtgttgacatggacattgacgatagtgattatgatgatgagtatgattactcg
actagcctgcaagatcttggggaaggatttctgaagaatttctgtaaggaggcggcaaca
tcattcttcaacgagtatggcctcattagtcatcaaatcaactcatataatgacttcata
caaaatggcatacaaagagtcttcagttcttttggcgagattatagtggagcctggctat
gacccgtcaaagaagggagacaatgaatggcgctatgctttagtgaagtttgggaaggtt
actcttggtaggccaagtttttggggtggttctgacaatgataaggagtataatatgttg
cctaggcatgcccgacttcagaacatgacatactgcgctaagatgaaagtgaatatcact
gtcgaggtatataatcaacgacttgtcagcagtgataagtttaagactggaaaagaacgg
ttccttgacaaggaaattttaagtacagataccagagacattacggttggtagtgtccct
gtgatggtgaagtctgacttatgctggatgagggacgttgagaaaggtgactgtgatttt
gaccatggaggctattttattatcaagggtgcagagaagacatttattgcacaagaacag
agctgtctgaagaaacttctcattacaaataatcagggtctgacagtagcatataggtca
gaggtgaagaggcataggttaataattagactagtcgggatttctaaacttgaaaacatt
gaaggagtagagaaagtccttaccgtttacttcatgtcgacagaaatccctgtgtgggta
tggttttttgccctaggtgtttcatcggataaagaagttattgatctgattgattatggc
agtgaagatgccagcattttgaacatactttttgcctcaattcgcgatgccgataaagct
actgaaaaagtggatggaggcttccgtagggggaagaatgccctcaaatatgtggatgat
gtgataaagaaaactgcgtttccacccggggaaagcatggaagagtgcatcagcttgtat
cttttccccaatctcagaggtctaaagcaaaaggctcgctttcttgggtatatggtgaag
tccctgttacaagcctctgctggtcgcaggaaatgtgacaatagggatgactttaggaac
aagaggttggacttggcgggtgagcttctcgaacgagagctaaaggcgcatattggacat
gcaaggcggcgcatggcaaaggccttgcagagagacctttatggtgatcgggttgtgcgg
ccaattgagcactacctagatgcctccatagttactaatggcatttcaagagcattctca
actggagcatggtgtcatcccttcaagaaaatggagaggatgtctggtgtagtggcaaca
gttgggagagcaaatccgctgcagacaatgattgatatgcggaagacaaggcagcaggtt
caatatacagggaaggttggagatgccagatacccgcatccttcccactggggtaaagta
tgttttctctcaactccggatggtgagaattgtgggcttgtaaaaaatttggctaccacc
acaatagtaagtacaaatatattggagtctctactaccggaattgtctctctgtggaatg
gaaaaattggtggatgatacttctacctcactgcaagggaagttcaaagtttttctgaat
ggggattgggttggagtttgtgaagattccctctcatttgtctcggaactcaggaggatg
cgacgtaggaaaaagttgccacctcaggtggaaatcaaaagagatgaaaagcaaggagaa
gtacgagtatattctgatgctggaaggatcctacgccctctcttggtggttgagaatttg
aacaagataaaagcattgaaaggggaaaagcatccgttcaagtatttccttaacaaagga
ataatcgagcttattggagctgaagaagaggaagactgtagtactgcatggggcattaaa
tatctgttcatggaagaaaagggaaaatctgctgtaaagtacacacattgtgagctggac
atgtcattcctgttgggtttaagctgtagcattatcccatttgcgaatcatgaccatgca
aggagggtcctctaccaggctcagaagcactcgtcgcaggctattgggttttctaccaca
aatcctaaccttcgagtggatacactgtctcaccaactgcactacccccagaggtcactt
tttcagacaatgacgtctgactgccttggcaagccaggacaccaactgggtaaaaacaga
gttttgccgaagcccgaattgtacaatggtcagaacgcgattgtggcagtcaatgttcac
ttggggttcaaccaagaagatagcatagtaatgaatcgggcatcactggaacgtggtatg
ttccgatctgagcatatcagaagttacaaggctgaggttgacaacaagcactccctggag
aaaaggcggaagcctgatgattgtgtcaattttggcaagatgcagagcaagtttggtcgg
gttgacaatctcgatgaagatggctttccctacgttggtgcaaacttgcagagtggcgat
atcatcattgggaggtgcagtgagtcaggagctgatcatagcatcaaactgaagcacacc
gaaaggggaatggttcagaaggttgtgctttcttctaatgatgatggaaagaactttgcc
gttgtttctatgagacaggttcgctcaccgtgtcttggagacaagttctccagcatgcat
gggcaaaagggtgttctaggttttctggagtctcaagagaacttccctttcacagtacag
gggatagttccagatattgtgataaatccccatgcatttccgtcaagacaaactcctggt
caactcttagaagctgctttagggaagggaatcgcctctggtggttcaaagaaatatgcc
accccgttctctactctctctgtcgatgacatcgcagaacaactgcatagggctggattt
tcaagatgcggaaaagagagagtatacaatggtggaaccggtaaaatggctcgttccctc
atattcatgggcccaaccttttaccagcgcctgattcacatgtctgaagacaaagtaaag
ttcaggaacactgggccagtccaccctctcacccgtcaaccagtggcagatcggaagcga
tttggagggatcaagtttggagaaatggaacgtgactgcctaatagcccatggagcttca
gcaaacttgcatgagcgccttttcactctcagcgactcctcccaggtgtatatctgtcag
aaatgcgaacatgtagctaatgtgatccaacgatcagttgaaggaggacgcaagatcagg
ggtccctactgccggaattgcaattctgcagatgatcttgtcaaggcaaacgtcccgtac
ggagcgaagttactgtgccaggagctgttcagcatgggcatcagtttgaagttcgagact
cggttctcttag

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