Pyrus communis (pear): 137717460
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Entry
137717460 CDS
T10779
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137717460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137717460
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137717460
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137717460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
137717460
NCBI-ProteinID:
XP_068312944
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Position
15:3363342..3365008
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AA seq
273 aa
AA seq
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MSILPKGDSIEIREVWNDNLDEEFALIRDIVLKYPYVAMDTEFPGVVLRPVGDFKNINEF
NYKTLKDNVDMLKLIQLGLTFFDENGNLPTLSTENQYIWQFNFREFNVSEDIYASDSIEL
LRQCGIDFKKNNEKGIDVNRFGELLMSSGLVLSDNVYWVTFHSGYDFGYLLKLLTCRSLP
DTQTEFFNLIKVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTA
CTFRKLRDTFFSGSAEKYSGVLYGLGVESGQSS
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttaccgaagggggattcgattgaaatccgagaggtgtggaacgataatctc
gatgaagagtttgctctgattcgtgatattgttttgaagtatccgtatgtggctatggat
actgagtttccgggcgtggttcttcgcccggtgggggattttaagaacatcaatgagttt
aactacaagactctgaaggacaatgttgatatgttgaaattgattcagttgggtctcact
ttctttgatgagaacggcaaccttcccactctgtcgaccgagaaccagtacatttggcaa
tttaactttcgcgagttcaacgtgagcgaagacatatatgcgagcgattcgattgagttg
ttgcgtcagtgtgggattgatttcaagaagaacaatgagaaggggattgatgtgaatcgg
ttcggcgagcttttgatgtcttcagggcttgtattgagcgacaatgtgtattgggttacg
ttccatagtgggtacgactttggatacttgcttaagttgttgacttgtcggagtttgcct
gacacccagacggagttctttaatctgatcaaggtttatttcccagtgttgtatgatatc
aagcatctgatgaagttctgcaacagccttcacggtggcttaaacaagcttgcagaactg
ttggaagtggaacgagttggtgtgtgccatcaagcaggctccgacagtctgcttacagca
tgtacatttaggaagttgagggatactttcttcagtggctcagcggagaagtactccggt
gtgttgtatggtctcggcgttgagagtggacagagtagctaa
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