Pyrus communis (pear): 137717724
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Entry
137717724 CDS
T10779
Name
(RefSeq) cryptochrome-1-like isoform X1
KO
K12118
cryptochrome 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
137717724
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
137717724
NCBI-ProteinID:
XP_068313282
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Position
15:18573773..18578989
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AA seq
679 aa
AA seq
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MSGGGCSVVWFRRDLRVEDNPALAAAVRAGGVVCVFIWAPEEEGPFYPGRVSRWWLKHSL
AHLDSSLKNLGTSLITKRSNDSVSSLLEVVVSTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVNDVHDRPFTTFDAFWGRCLSMPYDPDAPLLPPKRIISGDV
SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLDYSYNRRKADGATT
SLLSPHLHFGEVSVRKAFHLARMKQVLWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWVVNQNYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGREFDRIDNPQFEGYKFD
PNGEYVRKWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEA
LSEMWQHEAASRAAVENGTEEGLGDSSESVPIAFPQDIQMEENNEPARNNPPGTRRYEDQ
MVPSITTSLARAEEEETSLELQNLTEETRAEVPTDLIVNQEPRRDMLNQGVFQTTHNNAV
PPPNAAVGMQHAVEDSTAESSSSTRRERDGGVVPVWSPSSSSYSEQFGSEDNSIGTSSYL
QRHPQSHQIMNWRRLSQTG
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgcagtgtggtttggttcaggagagatctgagggttgaagataac
ccagctttggcagctgcagtgagagcaggaggtgtggtttgtgtcttcatctgggctcct
gaggaggaaggccctttttatcctggaagggtttcaagatggtggctaaaacacagcttg
gctcatcttgattcctccctgaaaaatcttggcacttctctcatcaccaaaagatccaat
gacagtgtttcttctctccttgaagttgttgtttccactggtgccactcagcttttcttc
aaccacttatatgatcctatatcactggttagggatcaccgggcgaaggaggttttgact
gctcaaggtatagctgtgcgctcctttaatgcggatttgctctacgaaccatgggatgtt
aatgatgtccatgatcgcccgttcacaacctttgatgccttttggggaagatgtcttagc
atgccatatgacccggatgcgccacttctcccccctaagagaattatttcaggtgatgta
tcaaggtgcccttctgatacattggtttttgaagatgaatccgagaagggaagtaatgca
cttcttgctcgagcatggtcacctgggtggagtaatgctgataaggctctgaccacattt
ataaatggacccttgcttgattactcttataaccgcagaaaggctgatggtgctacgaca
tcattactttctccccatttgcattttggggaggtgagtgtgagaaaagcatttcatctt
gctcgcatgaagcaggttctttgggccaatgaaggcaacaaggctggtgaagagagcgta
aacctgtttctgaagtctatcggtcttcgggaatattcaagatacattagtttcaatcat
ccttacagtcatgaaagacctcttcttgggcacctaaagttcttcccctgggttgtaaat
cagaactactttaaggcatggagacaaggtagaactggctatccattggtggatgctggc
atgagagagttgtgggctactggctggctgcatgatcgaatacgagtagtagtttctagt
ttcttcgtaaaggttctgcaacttccatggaggtggggaatgaagtatttctgggataca
cttttagatgctgaccttgaaagtgatgctcttggctggcagtatatatctggtactatc
cctgatggccgtgaatttgaccgcatagataatccccagtttgagggttacaagtttgat
ccaaatggagaatatgtgcggaagtggcttcctgaacttgctaggctaccaactgaatgg
atacaccacccatggaatgcaccagaatctgtactccaagcagctggaattgaattagga
tcgaattaccctctccctattgtaggaatagatgcggcaaaaacccggttgcaagaagct
ttatcagagatgtggcagcacgaagctgcttcaagagctgctgttgaaaatgggactgaa
gaagggcttggagactcctctgaatcagtgccaattgcctttcctcaagacatacaaatg
gaggaaaataatgaaccagcgaggaacaaccctcctggcactcgaaggtatgaggatcag
atggtcccaagcattactacttctttggctagagctgaagaggaagaaacttctttggaa
cttcaaaatttaacagaagaaaccagagcagaagtgcctacagatttaattgtgaatcag
gaaccaagaagagacatgttaaaccaaggggtttttcagactactcataacaatgctgtt
ccaccacccaatgctgcagtagggatgcaacacgctgttgaagattcgactgcagaatct
tccagtagcactaggcgagaaagggatggaggtgtagttccagtttggtctccttcaagt
tctagctactcagagcagtttgggagtgaagacaatagcattggaacaagttcgtacttg
cagagacatcctcagtctcaccaaataatgaattggaggcggctatctcaaactgggtga
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