Pyrus communis (pear): 137718435
Help
Entry
137718435 CDS
T10779
Name
(RefSeq) RNA polymerase sigma factor sigC-like
KO
K03093
RNA polymerase sigma-I factor
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137718435
Transcription machinery [BR:
pcox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
137718435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
137718435
NCBI-ProteinID:
XP_068314085
LinkDB
All DBs
Position
15:7443130..7447226
Genome browser
AA seq
561 aa
AA seq
DB search
MGFGFRLNLLKSGFPPQRSQRSHWQTASSNSKLSSASVRGREGSFNSARLSFLSIISEEG
ETSGKDTLKIYSCSSASPQILEDGFSDLEEIRFRRVPKSSLSNTIGNNQMPDGDFISSKG
IEACSAAHFSLLLKNLDALEETFANSDALKLENEILLQLGRLGALQLFDAYLSRTLTSSS
FFYLSDIPTVPIEEDKMDKKVDNDRGQTIVRSGKKEERRSRKRASDNARVSSELLPPKTT
REGFKPPTVSSAKRASNSRRRRLTIVLNEAELSTGVKVIANLERVKATLEKETGTVATLS
CWAEAAGVHEKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRGLGVAMDDLLQAGNLGL
LQGAERYDHSRGYRFSTYVRYWIKKSMSRLVARHARGIQIPFMLSKAINQIQKARKATYN
SQMKYPNDDEIAKITGLSLVRIRSASTCLRVVGSIDDKMWDSSAGTFMEFTADKSIKSPE
ETVMRQHMKKDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLFDVSKEWIRKIEK
KALTKLRDNETHRSLSHYLNN
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggggtttggttttaggctgaacctcctcaagtctggcttcccacctcagcgttctcag
cgttctcactggcaaactgcttcttctaattccaagctctcttctgcttctgttagaggc
agggagggctctttcaactcggcaaggctgtcatttctgtcaattatttccgaggaaggt
gagacttccggtaaagatactctgaaaatctactcttgctcatctgcttccccacaaatc
ttagaggatggcttctcagatttggaagagataagatttaggagggtgccaaagagtagt
ttatcaaatacgattgggaataaccagatgcctgacggtgactttatatccagtaaaggc
atagaagcttgcagtgcagctcattttagtttgttactgaaaaatcttgatgctttggag
gagacttttgctaattcggatgcgttaaagttggaaaatgagatacttttgcagttagga
aggcttggagctctacagttatttgatgcctatctgtcaagaactcttacatcatcaagt
tttttttatttgtctgacatacctacggtacccattgaagaggataagatggataagaaa
gtagataatgacagaggccagactattgttcggtctgggaagaaggaagaacgaagatca
aggaaaagagcatcagataatgccagagtttcttctgaattattgcctcctaaaacaact
cgggaaggttttaagccgcctactgtttcatcagcaaaaagagcatcaaattctcgaagg
agaagacttacaattgttctaaatgaggcagaactgtcaaccggggttaaggtgatcgcc
aacttggagagagttaaggcaaccttggaaaaggaaactggtaccgtagctaccttaagt
tgctgggcggaagcagctggagttcacgagaaggtgctgttacagaaattgcattttggt
tggtattgccaggatgagcttataaggagcactcgctccttagtcctatacctagctaga
agctatagagggctaggagtagccatggatgatttactgcaggccggaaacttgggtctc
ctgcaaggtgcagaaaggtatgatcactcgaggggttacagattctcaacctacgtccgg
tattggataaagaaatcaatgtcaagattggtggcacggcatgctagggggatccaaatt
cctttcatgctaagcaaggcaataaatcagatacagaaagctcgcaaagccacttacaac
agccaaatgaaataccccaacgatgatgaaattgcaaagattacaggtctttctttggtg
agaatcagatcagctagcacatgcttgagagttgtgggttcgatagatgacaagatgtgg
gatagctctgctgggacatttatggaatttacagcggacaagtcaataaagagccctgaa
gaaactgtaatgaggcaacacatgaaaaaagacattcatgatctgctgaagtgcttgaac
tcgaaggagaggcaagtgttggtgctgcgatatggactaaacaactacgaccccaagtca
cttgaggagattggaaagcttttcgatgtgagtaaggagtggatacggaagatagaaaag
aaagctctcacaaagctaagggacaatgaaacacacagaagtttaagccattacttgaat
aactag
DBGET
integrated database retrieval system