Pyrus communis (pear): 137718820
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Entry
137718820 CDS
T10779
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137718820
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137718820
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137718820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
DUF3487
Motif
Other DBs
NCBI-GeneID:
137718820
NCBI-ProteinID:
XP_068314459
LinkDB
All DBs
Position
15:22114581..22119262
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AA seq
461 aa
AA seq
DB search
MSTMNLAVVLVAVAVVLFGRFFITKANVVLMGNNVTLSFDDKEATFAPEVKGSGECGVLY
LAEPPDACSTLTNQVEQGTNYSSPFVLIVRGGCSFEDKVRRAQKAGFKAAIIYDNEDSNI
LVSKTVIPFCVENTVAGSSAGIKIYAVFVSKTSGELLKKYTGLTNMELWLIASFENTAWS
IMAISFISLLAMSAVLATCFFVRRHRIRRERPQASRVQEFHGMSKRLVKAMPSLKFTTVL
EDNCTSSTCAICLEDYNFGEKLRILPCRHKFHALCVDSWLTSWRTFCPVCKRDARANTGE
LPASESTPLLSSGPSSMASSVLSSMRSSVASSSAIQIGPSLSRNPSLSHSPSYASTGHIQ
QSLRSSYRQSPSISASRSSMDLRNASSQRSHVSYFVSPHSLGYPTLLPPNSRYMSVGHIP
SPSNASPSYMSSSNHRPHPLHCSESAATFSPFSSAQSLPEC
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagcactatgaatctggcggtggttctggtggcggtggcggtggttctgttcggccga
tttttcatcaccaaggccaatgtggtgctgatggggaacaacgtcactctctctttcgac
gacaaggaagctacttttgctccggaggttaagggttccggggaatgcggagtattgtat
ttggcagagcctcctgatgcgtgctcgacattgactaatcaagtcgaacaaggcacgaat
tatagctcccccttcgttttgatcgtaagaggagggtgtagttttgaggataaagttaga
agagcacaaaaggccggcttcaaagctgcaattatctacgacaatgaagatagcaacatc
ttggtttcaaaaactgtaattcccttttgtgtggaaaatacagtggcaggaagctcagct
ggtataaaaatatacgccgtgttcgtttcgaaaacttctggtgaactactaaagaagtac
actggacttactaacatggagctgtggctaattgcaagctttgagaatacagcatggtca
atcatggcaatctctttcatttcattgcttgccatgtctgcagtgctggctacttgtttt
ttcgttcgcaggcatcgaataagacgagagaggcctcaagcttcccgtgtccaagaattt
catgggatgagcaaacgcttagtaaaagcaatgccaagtttgaaatttaccactgtttta
gaggacaactgcacatcaagcacatgtgctatatgtcttgaggactataactttggagaa
aaactcaggattctgccatgtcgccataagtttcatgctctctgtgtggattcttggctt
acttcatggagaaccttttgtccagtttgcaagcgtgatgcaagagctaacacgggtgaa
ctacccgcttcagaatccacaccattgctttcgtccggcccatcctccatggcatcttcc
gtactttcatctatgagatcatcagtagcatcatcttcagcaatacagataggaccatca
ttgtcacggaacccttcattgtctcattctccctcttacgctagcacaggtcacattcag
cagtctcttaggtcctcctatcgccagtccccttctattagtgcaagcagaagttcaatg
gacctccgaaatgcctcgtctcaaaggtcccatgtttcctattttgtttcaccccattcc
ttgggttacccaaccttattacccccgaattcaagatacatgtctgttggacacattcca
agccctagcaatgcatcaccaagctacatgagctcttccaatcatcgaccgcatccacta
cattgtagtgaatcagctgcaacgttttctcctttttcttctgctcaatctcttcctgaa
tgctga
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