Pyrus communis (pear): 137720033
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Entry
137720033 CDS
T10779
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137720033
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137720033
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Zn_ribbon_Elf1
HVO_0758
DUF2250
Motif
Other DBs
NCBI-GeneID:
137720033
NCBI-ProteinID:
XP_068315133
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Position
16:complement(4424385..4426548)
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AA seq
379 aa
AA seq
DB search
MEKDLLELFDAVKKSADAATSCDGGAEESECLDAFEQLNNFPVTHQILVSTQVGKRLRHL
TKHPRKKIQSVASGLLEKWKEIVMSEVGKNVKNGNLERIDSLKRDSPRADSPRPEKVQKT
SSVKVEKVSKAEPVEVKKVDRDAKPSSEKAYSSGTIKTERKVQNVNPVKTEKAASVESVK
VEKVAKDVKKPALNSSDPPKLTNMIKCNDTARDKVRVLLHEALSKVSEEGDERFVDEVNA
ADPIRVAVTVESVLFENWGGSTGSQKAKYRSLIFNLKDQKNPDFRRKVLLGHIKAERLVD
LSTAEMASDQRQEENQKLEQKALFECERGGAPKATTDQFKCGRCGQRKTTYYQMQTRSAD
EPMTTYVTCVNCNNRWKFC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatcttctggagttgttcgacgccgtgaagaaatcggcggacgccgccaca
tcttgcgacggaggagccgaggaaagcgaatgccttgatgccttcgagcagctcaataat
tttcccgtcactcatcaaatcctcgtctcaacccaagttggaaagcgtcttcgacatctc
acaaaacatcctagaaagaaaatacagtcggttgcttcaggcctgttggagaaatggaaa
gagattgttatgagcgaggtagggaaaaatgtgaaaaatggaaacttggaaagaatagac
tctctaaaacgtgattctccacgtgccgacagccccaggcctgagaaggttcagaagaca
tcttctgtgaaggttgagaaggtttccaaggctgaacctgttgaggttaagaaggttgat
cgtgatgccaaaccaagctctgagaaagcttatagttccggaactatcaaaacagaaaga
aaggttcaaaatgttaatcctgtcaagactgagaaagctgcttcagtggagagtgtgaag
gttgaaaaggtagcgaaggacgtgaagaaaccagcactgaactcttctgatcccccaaag
ttaaccaatatgattaagtgtaatgatacagctcgggacaaagtgagggtactgctgcat
gaggctttgtccaaggtttctgaggagggtgatgaaaggtttgtggatgaggtgaatgca
gctgatcctattcgagttgctgtcaccgtggaatctgtgctgtttgagaactggggtggt
tccaccggttcccagaaggccaagtatcgatctttgattttcaacctgaaggaccaaaag
aatccagatttccgcagaaaagttctgcttggacatatcaaggcagagaggctcgtggac
ctgtcaacagcggaaatggcaagtgatcagaggcaagaggagaaccaaaagcttgaacaa
aaagcattgtttgagtgcgagcgtggaggtgcaccaaaagccacaaccgatcaattcaaa
tgcggtcgatgcggacagcgcaagaccacttactaccaaatgcagacccggagtgcggat
gaacctatgacaacgtatgtaacatgtgtaaactgcaataatcgttggaagttctgttag
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