Pyrus communis (pear): 137720148
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Entry
137720148 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137720148
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
137720148
mRNA degradation factors
5'-3' decay
Decapping complex
137720148
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137720148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137720148
NCBI-ProteinID:
XP_068315258
LinkDB
All DBs
Position
16:12668999..12675581
Genome browser
AA seq
510 aa
AA seq
DB search
MNSNRGRYPPGIGAGRGGGMNANPPFQSRPPHQQQYVQRNPLPNHHHQQQYFQQQQQHQQ
HQQQQHQQQQLQQQQQWLRRGQLGGSTSADSAVDEVEKTVQSEAVDPSSQDWKARLKIPP
ADTRFRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARA
KNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTG
GTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLVMDEADKLMSPEFQPSVE
QLIRFLPSHRQILMFSATFPVTVKDFKDRYLKKPYVINLMDELTLKGITQFYAFVEERQK
VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR
NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYE
DRFNLYRIEQELGTEIKQIPPHIDQAIYCR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtaatagagggaggtacccgccggggatcggagctgggaggggcggcggcatg
aatgcgaaccctccattccagtcccgtccgccgcatcagcagcagtatgtacagaggaac
cctttgccgaaccatcatcaccagcagcagtactttcagcagcagcagcaacaccaacag
catcaacagcagcaacaccaacagcagcagctacaacagcaacagcagtggctcaggaga
ggccagttgggtgggagtacgagtgctgattcggccgttgatgaggtggaaaagaccgtg
cagtcggaagctgtcgacccgagttcgcaagattggaaggcgaggttaaagattccacca
gctgatacacgtttcagaacagaggatgtaacggcaactaaaggaaatgagtttgaggat
tattttctgaaacgtgagctgctgatgggaatatatgagaagggatttgaaagaccatct
cctattcaggaagaaagtattccaattgctttaactggtagtgatattcttgctagggct
aaaaatgggacgggaaagacagctgcattttgcatccctgcattggaaaaaattgatcaa
gataacaatgtgatacaagttgttattcttgttccaactcgtgagttggctcttcaaaca
tcacaagtctgtaaggagctagggaagcatttgcaaattcaagttatggttacaactgga
ggcaccagcttaaaggatgatatcatgcgtttatatcaaccagttcacttgcttgttgga
actcctggaagaattttagatcttgcaaagaaaggtgtttgcatcttgaaagattgttct
atgcttgttatggatgaggctgataaacttatgtccccggaatttcaaccttcagtagag
cagttgatccgcttcttaccttcacatcgacagattttgatgttttcagctacatttcct
gttactgtcaaggactttaaggatagatatctgaaaaaaccgtatgttatcaatcttatg
gatgagcttactctaaagggtattacacaattttacgcctttgtcgaggagagacagaaa
gtccactgcctaaacacccttttctctaagcttcaaataaaccagtcaatcatattctgt
aactctgtgaatcgggtcgaattgttggccaagaaaattacagaacttggctattcttgt
ttctatattcatgcaaagatgctgcaagaccatcgtaacagagtatttcatgacttccgt
aatggtgcatgcagaaatcttgtttgtaccgatctctttacaagaggaatagatattcaa
gcagttaatgttgtcattaactttgattttccgaagaactcagagacatatcttcacagg
gttggtcgctctggaaggtttggacaccttggtttagctgtgaatttgatcacctatgag
gaccgtttcaacttgtatagaattgagcaagaacttggcactgagataaagcaaattcct
ccccatatcgatcaggcaatttattgccggtga
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