Pyrus communis (pear): 137720228
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Entry
137720228 CDS
T10779
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137720228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137720228
Spliceosome [BR:
pcox03041
]
Complex A
Other components
Complex A specific factors
137720228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
137720228
NCBI-ProteinID:
XP_068315370
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Position
16:complement(3770755..3774215)
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AA seq
791 aa
AA seq
DB search
MEAALQSNPNLPPPIESLDPHPPHSDFIPPPPTEALASDSNGPSQPAPTETLASYAQDPS
TNPNTATENGNSTDACKVLAIMKPLLSENGLTNTTSGNERDGSGGEEETTSRRRRRSRWD
PQPESDNQSGGGETGSGTRKRKSRWADEEPKQAIQLPDFMGGIEFDPEIQALNSRLLEIS
RMLSSGLPLDDRPEGARSPSPEPIYDNMGIRINTREFRARERLNKERQEIIAQIIKRNPA
FKPPADYRPPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVK
EGRSQQKRDLKPDPSENEDLHVLVEADTQDALDAAAGMVEKLLQPVDEVLNEHKRQQLRE
LASLNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKGTTG
KKMDDEYQNFLAELGGTVPESATKQTATLALGPGNSTSSNPPWANSTGSASASSHPGLGS
IGVKPVKDYDETNLYIGYLPPTFDDDGLIQLFSPFGDIVMAKVIKDRVTGASKGYGFVKY
GDVQMANNAIARMNGYRLDQRTIAVRVAGKPPQPAAPPGPPASALPTYAVPQPVGAYPSQ
QFTAGGPLGNAPPTSYAGTPVPWGPPVPPPYAPYAPPPPHPPGSTMYPPPMAGQHMAPYG
ARYPPPPGAPPQPVTSSEAQQSYPPPGVQSEHNVSTQSLQSNMYGGSSAPMPPNGQHTYP
AASYGYSSYYNAVPPPPPPPAHVPGSTADQSQNIGNVPWATSAQVPPHASSAERTTYGAD
AEYEKFMAETK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgctctccaatcaaaccctaaccttcctcctccaatcgaatccctagatcct
caccctcctcattccgatttcattcctcctccccctacagaagccctagcctcagattct
aatggcccatctcaaccagcgcccactgaaaccctagcatcctatgctcaagacccctcc
acgaatcccaataccgctactgagaacggtaactcgactgacgcctgcaaggtacttgct
attatgaagccgctgctgtcggaaaacggattgaccaacaccactagcggcaacgaaagg
gatggctcgggcggggaggaggagacgaccagcaggcgccgtcgccgcagccggtgggat
cctcagcccgagtcggacaatcagagtggtggtggcgagacgggcagtggcacgaggaag
aggaagtcgcggtgggcggatgaggagccgaagcaggcgattcagctgccggatttcatg
ggaggtattgagtttgatccagaaattcaagctttgaatagtaggttgcttgagattagt
cgaatgctgtcttcggggttgcccttagatgatcgtcccgaaggggctaggtctccttcg
ccggaacctatatatgataacatgggaattaggattaatactagagagttccgtgcccgt
gagaggttgaacaaagagaggcaggaaattattgcccagattattaagaggaacccagca
tttaaacccccggctgattacaggccacccaagcttcacaagaagctttacataccgatg
aaggaatatcccggatacaattttatcggacttatcattgggccaaggggtaatacccag
aagaggatggagaaagaaactggtgcaaaaattgtcattaggggtaaaggttcggtgaaa
gagggtaggtcacaacagaagagggatttgaaacctgacccttccgagaacgaggacttg
catgttttggttgaggccgacacacaagacgctcttgatgctgcggctgggatggtggag
aaactcttgcagcctgtcgatgaggtgttgaatgagcataagaggcaacaacttagggaa
cttgcgtcattgaatgggacaataagggatgaggagtattgtaggttgtgtggtgagcca
gggcaccgtcagtatgcttgtccatcacgtacttcgacctttaagagtgatgttctttgt
aagatatgtggtgatggtgggcatccaaccattgattgcccagtgaagggtacaactggg
aagaaaatggatgatgagtatcagaacttcttggctgagttaggggggacagttcctgaa
tctgcaactaagcagaccgctacattagcacttggcccaggcaacagtacatcaagcaat
cctccttgggctaacagtactggcagtgctagtgcatcatcacatccaggcttgggatca
attggagtcaagccagtcaaggactatgacgagacaaacttgtacattggatacttgccg
cctacttttgacgatgatggtttgatccaattgttttcaccatttggtgatattgtgatg
gccaaagttatcaaggaccgagttactggagcaagtaaaggttatggttttgtgaagtac
ggagatgttcaaatggctaataatgcaattgcacgcatgaatggttatcgcctagaccag
cgaaccattgctgtcagagttgctggcaagcctcctcagcctgctgcgcctcctggacct
ccagcatcggcactgcccacatacgcggttccccagcctgttggtgcctatccatcccag
cagtttaccgcaggtggtcctcttgggaatgcaccacctactagctacgcgggtactcct
gttccttgggggccccctgttcctccgccttatgctccttatgctccacctcctccacat
ccccctggttcaaccatgtatcctcctcccatggcgggtcaacatatggctccttatggt
gcacgataccctcctccacctggggcaccacctcaaccggtgacttcaagtgaagcacaa
cagagttatccccctccaggggttcaatctgaacacaatgtctctacccaatctctacaa
tctaatatgtatggaggctcctcagcaccaatgccaccaaacggccaacacacttatcct
gctgcttcgtatggttactcatcttactacaatgcagttccaccacctccgcctcccccc
gcccatgtacctggatcaactgcagaccaatctcagaacattggtaacgttccatgggcc
acgagtgctcaggttccccctcatgcttcttctgcggaaaggacaacttatggtgcagat
gcagagtatgagaagttcatggcagaaacaaaatga
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