Pyrus communis (pear): 137720351
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Entry
137720351 CDS
T10779
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137720351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137720351
03041 Spliceosome [BR:
pcox03041
]
137720351
03036 Chromosome and associated proteins [BR:
pcox03036
]
137720351
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137720351
Spliceosome [BR:
pcox03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
137720351
Complex B
137720351
Complex C
U2 SnRNP specific factors
137720351
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
137720351
TFTC complex
137720351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
137720351
NCBI-ProteinID:
XP_068315512
LinkDB
All DBs
Position
16:6944995..6949880
Genome browser
AA seq
1211 aa
AA seq
DB search
MYLYSLTLQRATGIVCAINGNFSGGKAQEIVVARGKVLDLLRPDENGKIQTLLSVEIFGA
IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMVGACEKQKLVYVLNRDTSARLTISSPLEAHKSHTIVYSICGVDCGFDNPM
FAAIELDYAEADQDSTGQAANEAQKHLTFYELDLGLNHVSRKWSDQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQDKPDLRAVIPRRADLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDIFKVTLDHDNDKVSELKIKYFDTIPVTTSMCVLKSGFLFAASEFGNHSLYQFQAI
GEEPDVESSSATLMETEEGFQPLFFQPRKLKNLVRIDQVESLMPIMDMKVNNLFEEETPQ
IFTLCGRGPRSSLRILRPGLAISEMAVSELPGVPSAVWTVKKNVSDEFDAYIVVSFANAT
LVLSIGETVEEVSESGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNTIRILSLDPDDCMQILSVQSLSGVPESLLFLEVQASIGGEDGADHPASLFL
NAGLRSGILFRTVVDMVTGQLSDSRSRFLGLRAPKLFSISVRGKHAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCSEGVVSVAGNALRVFTIERLGETFNETVIPLRYTP
RKFIIQLKRKLLVIIESDQGTFTAEEREAAKKECFEAAGLGENGNGNVEQMENGGDEEDP
LSDEHYGYPKAESDKWVSCIRVLDPKTATTTCLLELQDNEAAFSICTVNFHDKEYGTLLA
VGTAKGLQFWPKKSVTAGYIHIYRFLDDGKALELLHKTQVDGVPLALCQFQGRLLAGIGP
VLRLYDLGKKRLLRKCENKLFPNTIVSIQTYRDRIYVGDIQESFHYCKYRRDENQLYIFA
DDCVPRWLTASFHIDFDTMAGADKFGNVYFVRLPQDVSDEIEEDPTGGRIKWEQGKLNGA
PNKVEEIVQYHVGDVVSCLQKASLIPGGGECIIYGTVMGSLGSLLAFTSRDDVDFFSHLE
MYMRQEHPPFCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEIL
KKLEEIRNKII
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagccttactctccagcgcgccaccggcatagtttgcgccatcaacggc
aatttctccggcggaaaggcccaggagatcgtcgtcgcccgcggcaaagttctcgacctt
ctccgtcccgacgaaaatggtaagatccagactctcctctctgttgaaattttcggcgca
attaggtcgttagctcagtttaggctcactggctctcagaaggactatattgttgtcggg
tccgattcgggtcggattgtgattctagagtataataaggagaagaatgtgtttgataag
attcaccaggagactttcgggaaatcgggttgtcgaaggatagttccgggccagtatttg
gccattgaccccaaggggagggctgttatggttggggcatgtgagaagcagaagcttgtt
tacgttttgaatagggatacttctgctaggttgacgatttcgtctccgttggaggctcac
aagtcgcatacgattgtgtattcaatttgtggggttgattgtgggtttgataatcccatg
tttgctgccattgagttggattatgcggaagctgatcaggactctactgggcaggcggct
aatgaggcgcagaagcatttgactttctatgagctcgatcttgggctcaatcacgtatcg
aggaagtggtcagatcaggttgataatggtgcaaatatgctggtcacagttcctggaggt
ggggatgggccaagcggtgtattggtctgtgcggaaaattttgtgatttataagaaccag
gataaaccggatctcagggctgtgattcctaggcgtgcagatttgcctgcagagcgtggg
gttcttatagtttcagcagctatgcacaagcagaaatcaatgttcttttttcttttgcag
acagagtatggagatatatttaaggttactctggatcatgataatgacaaggtctcagaa
ttaaagatcaagtattttgatacaattccagttacaacttcaatgtgtgtgttaaaatct
gggtttttgtttgctgcgtcagagtttgggaatcactctttgtaccagttccaggcaata
ggggaagaacctgacgtggagtcttcatcagccacattgatggaaacggaagaaggtttc
cagcctttgtttttccagcccagaaaactaaaaaaccttgttaggattgatcaagttgag
agcttaatgccgataatggatatgaaggtcaataatctctttgaggaagaaacacctcaa
atatttacactttgtgggcggggtcctcgttcatccctcaggatactaagacctggttta
gctatcagtgagatggccgtgtcagagcttcctggtgtaccgagtgcggtctggacagtg
aagaagaatgtgtccgatgaatttgatgcatacattgtggtgtcatttgcaaatgctact
cttgtgctttcaattggtgagacagttgaggaagttagtgaaagtgggtttcttgacact
accccatcacttgcagtttctttgataggtgatgattctctcatgcaagtgcacccaaat
ggaattagacatattagggaagatggacgtattaatgaatggagaactcctggaaagagg
acgattgtaaaggttggctctaatagacttcaggtagttattgcactgagtggaggagaa
ctcatatattttgaggttgatatgacgggtcagttaatggaggtggagaaacatgaaatg
tctggagatgtagcttgtctagacattgctcctgtacctgaagggagacagagatctcgt
ttccttgcagttggttcatatgacaacacgattcgtattttgtcattggatcctgatgac
tgtatgcaaattcttagtgtgcaaagtctttctggagttccagaatctcttctctttctt
gaggttcaggcatcaattggtggggaggatggtgctgatcatcctgctagccttttccta
aacgctggtctacgctctgggattttgttcagaacagtggtggatatggtcacaggtcag
ctctctgattcccgttctcgattcttgggactaagagcgccaaagctattttctattagt
gtgagaggcaagcatgctatgctttgcttgtcaagtcggccctggcttggttatattcat
caaggacattttctcttaacacccctatcgtatgagacccttgaatatgctgcctcattt
tcatccgatcaatgttcggaaggtgtagtttctgttgctggaaatgctttgagggttttt
actattgaaagattgggagaaacatttaatgaaactgtgattccactgaggtacacccct
agaaagtttatcattcagctcaaacgaaagcttttggtaattattgaaagtgatcaagga
acgttcacagcagaagagcgtgaagctgccaaaaaagagtgttttgaggctgcgggttta
ggtgaaaatggaaacggtaatgtagagcagatggaaaatggcggagatgaggaggatccc
ttatctgatgagcactatgggtatcctaaggcagagtctgacaaatgggtgtcttgcatt
agagttcttgaccccaagacagcaactacaacatgtcttctggagcttcaggataatgaa
gctgcattcagtatctgtacagtgaatttccatgacaaggagtatggtacgcttttagct
gttggcacagcgaagggactgcagttttggccaaaaaagagtgtaacagcaggctatata
catatatataggttcctagatgatggaaaggcccttgaacttttgcacaagacacaagtg
gatggtgttcctcttgccttgtgccagtttcaaggaaggttactagctgggatcggacca
gtgctcagactctatgatttggggaagaaaagattgctcaggaagtgtgagaataagctg
tttcccaacacaattgtgtcaatccaaacttatcgcgatcggatttatgtaggtgacatt
caagagtcattccactactgcaagtataggcgggatgagaatcaattgtatatctttgct
gatgattgtgttccaagatggcttacagcatccttccatatagattttgacaccatggca
ggtgcagacaagtttgggaatgtttattttgtgcggttaccacaggatgtttcagatgag
atagaagaagatccaacgggtgggaggataaaatgggagcagggaaagttgaatggcgct
cccaacaaagtagaggagatagtgcagtatcatgttggtgatgttgtcagctgcttgcag
aaggcatctctaattccaggtggtggggagtgcatcatctatggaacagtgatgggtagc
ttgggttccttacttgcgttcacctcacgtgatgacgttgacttcttttctcacttggag
atgtatatgaggcaggagcatccacccttttgtggtagagatcacatggcttatagatca
gcgtatttcccggtcaaggatgtgattgatggagatctatgtgagcagttcccaacattg
cccatggatctgcagagaaaaattgcagatgagttggatagaactcctggagagatactg
aagaagcttgaggaaattcgaaacaagatcatttaa
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integrated database retrieval system
