Pyrus communis (pear): 137720545
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Entry
137720545 CDS
T10779
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137720545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137720545
Spliceosome [BR:
pcox03041
]
Common components
Common spliceosomal components
SR proteins
137720545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_YTH1
RRM_7
RRM_occluded
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
137720545
NCBI-ProteinID:
XP_068315730
LinkDB
All DBs
Position
16:complement(695554..700468)
Genome browser
AA seq
268 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIKEWEVEDLFYKYGRIVDIELKIPPRPPCYSFVEFESSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGGYDRGSSGGGSGGGRFGVSRHSEYRVI
VRNLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTYGLVDYTNSDDMKYAIRKLDDTEFK
NPWARTHIRVKYYDRSPSRSRSRSRSRSRSVRRNRSKSLDRSVSKSVSRSVSRSRSPSPV
KSSRPRSISRSRSRSRSESPLAARSGSA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgattttctcgcacgatctacgttggcaaccttccctcagatataaaagaa
tgggaggttgaagatctattctacaagtatggccgcatagtggatattgaactgaagatt
ccacctcgtcctccatgttattcttttgttgagtttgagagttctcgggatgcagaagat
gcaatcagggggcgtgatgggtataactttgatgggtgccgtttaagggttgaacttgcc
catggtggtaggggcccatcttcaagtgatcgtcgtggtggatatgaccgaggcagcagt
ggcggaggcagtggtgggggacgatttggtgtttcacgtcattctgaatatcgagttatt
gttcgtaatctcccttcttcagcctcgtggcaagacttgaaggatcatatgcgtaaagct
ggtgatgtgtgttttgctgaggtttctcgtgacagtgaagggacttatggcttggtcgat
tatacaaattctgatgacatgaaatatgctatccggaagcttgatgatactgaattcaaa
aatccttgggcaaggactcatattcgggttaaatattacgataggagtccctcaaggagt
cgtagtagaagtcgtagcagaagccgaagtgtgagaaggaatcggagcaagtcattggac
cgatctgtatcaaaatcagtatcaagatcagtatcaagatctaggtctccatcgccggtt
aaatcttccaggccacgatcaatatcaaggtcaaggtcaaggtcaaggtcagaatcaccc
ctagcggctcggtctggtagtgcctga
DBGET
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