Pyrus communis (pear): 137720567
Help
Entry
137720567 CDS
T10779
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pcox Pyrus communis (pear)
Pathway
pcox04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
137720567
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcox04040
]
137720567
Ion channels [BR:
pcox04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
137720567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
APOBEC4
Motif
Other DBs
NCBI-GeneID:
137720567
NCBI-ProteinID:
XP_068315749
LinkDB
All DBs
Position
16:1403747..1406573
Genome browser
AA seq
592 aa
AA seq
DB search
MAMEVQIPRLHHCDLEKNAAEKFPKNIREALKKLHKKKILDLPDLVLQWWNQIVLVFCVI
ALSTDPLFLYLLKVNNEQNCLTLDKTLATVTALLRFSIDFFYIFHIIFQFRASNVAHSFQ
TSRQGKSVAETRARARKYLLMYLLVDMLIILPLPQVLIFAVIPKIKHSRAFFVASISKNM
FVLQSLLRVFRIGSSLKVARRGSSILAESAWADLFLFMLAGHVIGAFWYIFSIERIVRCW
EESCEYHRGAHCYLFCDDTFAANAPVYNSCSANTMNFGIYYDALESIVLDSTPFVKRISY
CFWWGVQNLSSLGQSLKPTTIYVWEIYFSLAVSITGLVLLAILAGHLQEYVLSKIARSEE
MRLKKPEIELWMYFHSLPRSLKARIWQSMKHKLKKNIRIDVENFLHLLPVELCKDIKWHL
CSGPLREVPILRTMDEQLLEAICKHLTPVLYAKNSIIFHEGEPLAEMLFVTRGKLLTYTA
SAAARVRFLGKGDFYGEELFDWVLINCASLSNFPLSTETVKAQTEVEVFVLRAQQLKTVV
SKFWWLFTREQRRHSSLNTSFNVEQWKPRAAYALQAAWRRHKKETSTVRRRS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaggttcaaattccgcggctacatcactgtgacttagaaaaaaatgctgca
gaaaaattcccaaagaatatcagggaagcactgaaaaaattgcacaagaaaaagattctt
gatttaccagacctagtcctgcagtggtggaatcagatagttttagtcttctgtgttatc
gctctctcaaccgatcctttgttcttgtacctccttaaggttaacaacgaacagaattgc
cttaccctggacaaaacgttggcgaccgtaactgcgcttctgcgtttcagcatcgatttc
ttttatatatttcatatcatttttcaattccgtgcaagcaatgttgctcattcttttcaa
acctctcgacaaggcaaatcggttgcagagactcgggcaagagcacggaaatatttgttg
atgtacctactggtcgacatgcttataattcttccacttccacaggtgctaatttttgct
gtcattccaaaaattaaacattcgagggctttctttgtcgcaagtatatcgaaaaatatg
tttgtccttcaatctctgctaagggtatttcgaatcggctcctcgttaaaagtagctcga
aggggttctagcatccttgccgaatctgcatgggctgatctctttctttttatgcttgcc
ggtcatgttattggagccttctggtatattttttctatagaaagaatagtaaggtgctgg
gaagaatcctgcgaatatcatcgaggtgcgcactgctatttattttgcgacgacacattt
gcagctaacgcacccgtatacaactcttgctctgcaaacacaatgaattttggaatatac
tatgatgcccttgaatctatagttctggattcaactccttttgtaaaaaggatttcttac
tgcttctggtggggggtacaaaatctaagctccctcggccaaagcctcaaacccacaact
atctacgtatgggagatatacttttcacttgctgtttcgataacaggcttggtgctactt
gcaattcttgctggacatctgcaggaatatgtgctgtcaaaaattgcaagatcggaggaa
atgagattgaagaaaccagaaatagaattgtggatgtatttccattcacttcctcggagt
ctaaaggcacggatttggcaatccatgaaacacaaactgaaaaaaaatatacgcatcgac
gtggagaattttcttcaccttctacccgtggaactttgtaaggatataaaatggcatctc
tgctcaggtccactcagagaagtgccaatacttcgaaccatggacgaacaactgttggaa
gctatctgtaaacatctcacgccggtgctatacgcgaagaacagcatcatttttcatgag
ggagagccacttgctgagatgctcttcgtcacacgcggtaagctattgacttacaccgcc
tctgctgctgctagggtaagatttcttggcaaaggtgacttctatggagaagagcttttc
gattgggtgctgatcaactgtgccagcttatctaacttccccttgtcaactgaaactgtc
aaggcgcaaacggaagttgaagtgtttgttctaagggcgcagcagttgaagacggtagtc
tctaaattctggtggcttttcaccagagagcaacgccgccactcgagccttaatactagc
tttaacgtggagcaatggaaaccaagggcagcttatgctttgcaagcagcttggcgtcgc
cataaaaaagaaacctcgacggtgcgaaggagaagttaa
DBGET
integrated database retrieval system
